دورية أكاديمية

Analysis of Rocky Mountain spotted fever cases in Northern Mexico reveals genetic variability of Rickettsia rickettsii and the different distribution of genotypes.

التفاصيل البيبلوغرافية
العنوان: Analysis of Rocky Mountain spotted fever cases in Northern Mexico reveals genetic variability of Rickettsia rickettsii and the different distribution of genotypes.
المؤلفون: Brito-Lorán CB; Laboratorio de Investigación Clínica y Ambiental, Departamento de Bioquímica Microbiana, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional (IPN), Colonia Santo Tomás, Miguel Hidalgo, 011340, México City, México.; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México., Araiza-Rodríguez A; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México., Garcés-Ayala F; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México., Contreras-Pérez CU; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México., Montes-Colima NA; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México., López-Martínez I; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México., Hernandez-Cortez C; Laboratorio de Investigación Clínica y Ambiental, Departamento de Bioquímica Microbiana, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional (IPN), Colonia Santo Tomás, Miguel Hidalgo, 011340, México City, México., Castro-Escarpulli G; Laboratorio de Investigación Clínica y Ambiental, Departamento de Bioquímica Microbiana, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional (IPN), Colonia Santo Tomás, Miguel Hidalgo, 011340, México City, México. chelacastro@hotmail.com., Ramírez-González JE; Instituto de Diagnóstico y Referencia Epidemiológicos (InDRE) 'Dr. Manuel Martínez Báez', Secretaría de Salud, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480, Mexico City, México. jernesto.ramirezg@gmail.com.
المصدر: International microbiology : the official journal of the Spanish Society for Microbiology [Int Microbiol] 2024 Jun; Vol. 27 (3), pp. 689-695. Date of Electronic Publication: 2023 Aug 30.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Springer Nature Country of Publication: Switzerland NLM ID: 9816585 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1618-1905 (Electronic) Linking ISSN: 11396709 NLM ISO Abbreviation: Int Microbiol Subsets: MEDLINE
أسماء مطبوعة: Publication: 2018- : Switzerland AG : Springer Nature
Original Publication: Barcelona, Spain : Springer, c1998-
مواضيع طبية MeSH: Rocky Mountain Spotted Fever*/microbiology , Rocky Mountain Spotted Fever*/epidemiology , Rickettsia rickettsii*/genetics , Rickettsia rickettsii*/classification , Rickettsia rickettsii*/isolation & purification , Genotype* , Genetic Variation* , Phylogeny*, Mexico/epidemiology ; Humans ; Sequence Analysis, DNA ; DNA, Bacterial/genetics
مستخلص: Rickettsioses have been reported in parts of Mexico since the last century, with Rocky Mountain spotted fever (RMSF) being one of the most prevalent in northern states. Unfortunately, fatality rates for RMSF in Mexico are higher than in other countries, like the USA. The reason for this difference in fatality rates is currently unknown and could be associated with a genotype of the bacterium, but no comparative molecular typing has been conducted in Mexico to date. The purpose of this study was to analyze 47 RMSF samples with different outcomes from several states in northern Mexico to know the genetic variability of Rickettsia rickettsii, as well as to reconstruct its phylogeny, for which the following intergenic regions were sequenced: RR0155-rpmB, cspA-ksgA, RR1240-tlc5, and Spo0J-abc T1, as well as the following partial genes: ompA, ompB, and gltA. We identified 8 genotypes with different distribution and prevalence among the states analyzed, as well as a different association with case outcome; these genotypes were clustered in 2 clades and 5 lineages were revealed, some of them probably exclusive from Mexico.
(© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)
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URL CLC (2022) Genomics Workbench user manual: https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/User_Manual.pdf [accessed April 2022].
فهرسة مساهمة: Keywords: Rickettsia rickettsii; Human samples; Mexico; Rickettsioses; Rocky Mountain spotted fever; Tick-borne
المشرفين على المادة: 0 (DNA, Bacterial)
تواريخ الأحداث: Date Created: 20230830 Date Completed: 20240601 Latest Revision: 20240601
رمز التحديث: 20240601
DOI: 10.1007/s10123-023-00424-3
PMID: 37646898
قاعدة البيانات: MEDLINE
الوصف
تدمد:1618-1905
DOI:10.1007/s10123-023-00424-3