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Comparative and phylogenetic analysis of complete chloroplast genome sequences of Salvia regarding its worldwide distribution.

التفاصيل البيبلوغرافية
العنوان: Comparative and phylogenetic analysis of complete chloroplast genome sequences of Salvia regarding its worldwide distribution.
المؤلفون: Yu D; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China., Pei Y; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China., Cui N; Shandong Academy of Chinese Medicine, Jinan, 250014, China., Zhao G; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.; College of Traditional Chinese Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China., Hou M; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.; College of Pharmacy, Henan University of Chinese Medicine, Zhengzhou, 450046, China., Chen Y; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.; College of Traditional Chinese Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China., Chen J; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.; College of Pharmacy, Henan University of Chinese Medicine, Zhengzhou, 450046, China., Li X; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China. xwli@icmm.ac.cn.; College of Traditional Chinese Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China. xwli@icmm.ac.cn.; College of Pharmacy, Henan University of Chinese Medicine, Zhengzhou, 450046, China. xwli@icmm.ac.cn.
المصدر: Scientific reports [Sci Rep] 2023 Aug 31; Vol. 13 (1), pp. 14268. Date of Electronic Publication: 2023 Aug 31.
نوع المنشور: Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Nature Publishing Group, copyright 2011-
مواضيع طبية MeSH: Genome, Chloroplast* , Salvia*/genetics, Asia, Western ; Central America ; Phylogeny
مستخلص: Salvia is widely used as medicine, food, and ornamental plants all over the world, with three main distribution centers, the Central and western Asia/Mediterranean (CAM), the East Aisa (EA), and the Central and South America (CASA). Along with its large number of species and world-wide distribution, Salvia is paraphyletic with multiple diversity. Chloroplast genomes (CPs) are useful tools for analyzing the phylogeny of plants at lower taxonomic levels. In this study, we reported chloroplast genomes of five species of Salvia and performed phylogenetic analysis with current available CPs of Salvia. Repeated sequence analysis and comparative analysis of Salvia CPs were also performed with representative species from different distribution centers. The results showed that the genetic characters of the CPs are related to the geographic distribution of plants. Species from CAM diverged first to form a separate group, followed by species from EA, and finally species from CASA. Larger variations of CPs were observed in species from CAM, whereas more deficient sequences and less repeated sequences in the CPs were observed in species from CASA. These results provide valuable information on the development and utilization of the worldwide genetic resources of Salvia.
(© 2023. Springer Nature Limited.)
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تواريخ الأحداث: Date Created: 20230831 Date Completed: 20230913 Latest Revision: 20231120
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC10471775
DOI: 10.1038/s41598-023-41198-y
PMID: 37652950
قاعدة البيانات: MEDLINE
الوصف
تدمد:2045-2322
DOI:10.1038/s41598-023-41198-y