دورية أكاديمية
أعرض في EDS

Spatial scale influences the distribution of viral diversity in the eukaryotic virome of the mosquito Culex pipiens .

التفاصيل البيبلوغرافية
العنوان: Spatial scale influences the distribution of viral diversity in the eukaryotic virome of the mosquito Culex pipiens .
المؤلفون: Gil P; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Exbrayat A; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Loire E; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Rakotoarivony I; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Charriat F; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Morel C; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Baldet T; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Boisseau M; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Marie A; EID Mediterranée, Montpellier 34000, France., Frances B; EID Mediterranée, Montpellier 34000, France., L'Ambert G; EID Mediterranée, Montpellier 34000, France., Bessat M; Department of Parasitology, Faculty of Veterinary Medicine, Alexandria University, Alexandria 5410012, Egypt., Otify Y; Department of Parasitology, Faculty of Veterinary Medicine, Alexandria University, Alexandria 5410012, Egypt., Goffredo M; Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise 'G. Caporale', Teramo 64100, Italy., Mancini G; Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise 'G. Caporale', Teramo 64100, Italy., Busquets N; IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain., Birnberg L; IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain., Talavera S; IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain., Aranda C; IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain.; Servei de Control de Mosquits del Consell Comarcal del Baix Llobregat, Barcelona 08980, Spain., Ayari E; Institut de la Recherche Vétérinaire de Tunisie - Université Tunis El Manar, Tunis 1068, Tunisia., Mejri S; Institut de la Recherche Vétérinaire de Tunisie - Université Tunis El Manar, Tunis 1068, Tunisia., Sghaier S; Institut de la Recherche Vétérinaire de Tunisie - Université Tunis El Manar, Tunis 1068, Tunisia., Bennouna A; Department of Animal Pathology and Public Health, Hassan II Agronomy & Veterinary Institute, Rabat BP 6202, Morocco., El Rhaffouli H; Veterinary Division, FAR Military Health Service, Meknes 11080, Morocco., Balenghien T; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France.; Department of Animal Pathology and Public Health, Hassan II Agronomy & Veterinary Institute, Rabat BP 6202, Morocco., Chlyeh G; Département de Production, Protection et Biotechnologies Végétales, Unité de Zoologie, Institute of Agronomy and Veterinary Medicine Hassan II, Rabat BP 6202, Morocco., Fassi Fihri O; Department of Animal Pathology and Public Health, Hassan II Agronomy & Veterinary Institute, Rabat BP 6202, Morocco., Reveillaud J; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France., Simonin Y; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France.; Pathogenesis and Control of Chronic Infections, University of Montpellier, INSERM, EFS, Montpellier 34394, France., Eloit M; Institut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris 75015, France.; Institut Pasteur, The OIE Collaborating Centre for Detection and Identification in Humans of Emerging Animal Pathogens, Paris 75724, France.; École nationale vétérinaire d'Alfort, Maisons-Alfort 94700, France., Gutierrez S; ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France.
المصدر: Virus evolution [Virus Evol] 2023 Aug 24; Vol. 9 (2), pp. vead054. Date of Electronic Publication: 2023 Aug 24 (Print Publication: 2023).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101664675 Publication Model: eCollection Cited Medium: Print ISSN: 2057-1577 (Print) Linking ISSN: 20571577 NLM ISO Abbreviation: Virus Evol Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Oxford : Oxford University Press, [2015]-
مستخلص: Our knowledge of the diversity of eukaryotic viruses has recently undergone a massive expansion. This diversity could influence host physiology through yet unknown phenomena of potential interest to the fields of health and food production. However, the assembly processes of this diversity remain elusive in the eukaryotic viromes of terrestrial animals. This situation hinders hypothesis-driven tests of virome influence on host physiology. Here, we compare taxonomic diversity between different spatial scales in the eukaryotic virome of the mosquito Culex pipiens . This mosquito is a vector of human pathogens worldwide. The experimental design involved sampling in five countries in Africa and Europe around the Mediterranean Sea and large mosquito numbers to ensure a thorough exploration of virus diversity. A group of viruses was found in all countries. This core group represented a relatively large and diverse fraction of the virome. However, certain core viruses were not shared by all host individuals in a given country, and their infection rates fluctuated between countries and years. Moreover, the distribution of coinfections in individual mosquitoes suggested random co-occurrence of those core viruses. Our results also suggested differences in viromes depending on geography, with viromes tending to cluster depending on the continent. Thus, our results unveil that the overlap in taxonomic diversity can decrease with spatial scale in the eukaryotic virome of C. pipiens . Furthermore, our results show that integrating contrasted spatial scales allows us to identify assembly patterns in the mosquito virome. Such patterns can guide future studies of virome influence on mosquito physiology.
Competing Interests: None declared.
(© The Author(s) 2023. Published by Oxford University Press.)
References: mSystems. 2020 Sep 29;5(5):. (PMID: 32994288)
Bioinformatics. 2015 May 15;31(10):1674-6. (PMID: 25609793)
Viruses. 2017 Jun 08;9(6):. (PMID: 28594392)
Front Cell Infect Microbiol. 2021 Aug 30;11:694020. (PMID: 34527601)
Environ Microbiol. 2012 Jan;14(1):4-12. (PMID: 22004523)
Nature. 2019 Feb;566(7744):318-320. (PMID: 30787460)
J Virol. 2017 Aug 10;91(17):. (PMID: 28637756)
Viruses. 2020 Aug 31;12(9):. (PMID: 32878245)
Virology. 2019 Apr;530:85-88. (PMID: 30782566)
Cell Host Microbe. 2021 Aug 11;29(8):1305-1315.e6. (PMID: 34320399)
Parasit Vectors. 2016 Jul 25;9(1):414. (PMID: 27457250)
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549. (PMID: 29722887)
Microbiome. 2021 Jun 28;9(1):150. (PMID: 34183048)
Bioinformatics. 2009 Jul 15;25(14):1754-60. (PMID: 19451168)
PLoS Negl Trop Dis. 2020 Nov 30;14(11):e0008920. (PMID: 33253189)
Viruses. 2020 Sep 02;12(9):. (PMID: 32887342)
Science. 2015 May 22;348(6237):1261498. (PMID: 25999515)
Parasit Vectors. 2020 Jan 8;13(1):8. (PMID: 31915057)
PLoS Negl Trop Dis. 2021 Apr 26;15(4):e0009381. (PMID: 33901182)
Sci Rep. 2021 Apr 19;11(1):8448. (PMID: 33875673)
Annu Rev Virol. 2018 Sep 29;5(1):69-92. (PMID: 30048219)
J Med Virol. 2021 Jun;93(6):3362-3373. (PMID: 33219544)
mBio. 2018 Nov 27;9(6):. (PMID: 30482837)
Virology. 2018 Oct;523:74-88. (PMID: 30098450)
Virology. 2012 Jun 5;427(2):90-7. (PMID: 22425062)
J Virol. 2019 Aug 28;93(18):. (PMID: 31243123)
Virus Evol. 2022 Apr 16;8(1):veac036. (PMID: 35505691)
Mol Ecol. 2022 May;31(9):2545-2561. (PMID: 35229389)
Trends Ecol Evol. 2011 Sep;26(9):482-91. (PMID: 21641673)
Science. 2004 Mar 5;303(5663):1535-8. (PMID: 15001783)
Microorganisms. 2021 Aug 03;9(8):. (PMID: 34442732)
Nat Microbiol. 2023 Jan;8(1):135-149. (PMID: 36604511)
Nat Rev Microbiol. 2022 Jun;20(6):321-334. (PMID: 34983966)
Virus Res. 2018 Jan 2;243:83-90. (PMID: 29111455)
Parasit Vectors. 2016 Jan 13;9:18. (PMID: 26762514)
Ecohealth. 2009 Jun;6(2):239-49. (PMID: 19915916)
Emerg Microbes Infect. 2020 Dec;9(1):496-504. (PMID: 32106784)
Nat Commun. 2015 Sep 22;6:8147. (PMID: 26391192)
Curr Opin Virol. 2021 Aug;49:7-12. (PMID: 33991759)
Evol Bioinform Online. 2017 Jan 10;12(Suppl 2):35-44. (PMID: 28096646)
Mol Ecol. 2020 Jan;29(1):26-39. (PMID: 31561274)
Viruses. 2019 Nov 06;11(11):. (PMID: 31698792)
Mol Biol Evol. 2020 May 1;37(5):1530-1534. (PMID: 32011700)
Virus Evol. 2022 Feb 02;8(1):veac006. (PMID: 35242359)
Microbiome. 2018 Mar 20;6(1):49. (PMID: 29554951)
Virology. 2016 Nov;498:288-299. (PMID: 27639161)
Nat Methods. 2015 Jan;12(1):59-60. (PMID: 25402007)
Bioinformatics. 2009 Aug 1;25(15):1972-3. (PMID: 19505945)
Genome Res. 1999 Sep;9(9):868-77. (PMID: 10508846)
J Clin Microbiol. 2011 Sep;49(9):3268-75. (PMID: 21715589)
Microbiome. 2020 Jun 30;8(1):103. (PMID: 32605663)
Cell. 2018 Mar 8;172(6):1168-1172. (PMID: 29522738)
Nature. 2016 Dec 22;540(7634):539-543. (PMID: 27880757)
Bioinformatics. 2009 Aug 15;25(16):2078-9. (PMID: 19505943)
Mol Ecol Resour. 2019 Jan;19(1):128-143. (PMID: 30240114)
Mol Ecol Resour. 2021 Aug;21(6):1788-1807. (PMID: 33713395)
Viruses. 2015 Nov 11;7(11):5801-12. (PMID: 26569286)
ISME J. 2016 Feb;10(2):437-49. (PMID: 26296067)
Elife. 2021 Apr 27;10:. (PMID: 33904402)
Microbiome. 2019 Aug 28;7(1):121. (PMID: 31462331)
Viruses. 2018 Jan 12;10(1):. (PMID: 29329230)
Nat Microbiol. 2016 Jan 11;1:15015. (PMID: 27571759)
فهرسة مساهمة: Keywords: Culex pipiens; metagenomics; mosquito; virome
تواريخ الأحداث: Date Created: 20230918 Latest Revision: 20230919
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC10504824
DOI: 10.1093/ve/vead054
PMID: 37719779
قاعدة البيانات: MEDLINE
الوصف
تدمد:2057-1577
DOI:10.1093/ve/vead054