دورية أكاديمية
أعرض في EDS

Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence.

التفاصيل البيبلوغرافية
العنوان: Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence.
المؤلفون: Temmam S; Pathogen Discovery Laboratory, Institut Pasteur, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, The OIE Collaborating Center for the Detection and Identification in Humans of Emerging Animal Pathogens, Université Paris Cité, 75015 Paris, France., Tu TC; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Regnault B; Pathogen Discovery Laboratory, Institut Pasteur, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, The OIE Collaborating Center for the Detection and Identification in Humans of Emerging Animal Pathogens, Université Paris Cité, 75015 Paris, France., Bonomi M; Structural Bioinformatics Unit, Institut Pasteur, CNRS UMR3528, Université Paris Cité, 75015 Paris, France., Chrétien D; Pathogen Discovery Laboratory, Institut Pasteur, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, The OIE Collaborating Center for the Detection and Identification in Humans of Emerging Animal Pathogens, Université Paris Cité, 75015 Paris, France., Vendramini L; Pathogen Discovery Laboratory, Institut Pasteur, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, The OIE Collaborating Center for the Detection and Identification in Humans of Emerging Animal Pathogens, Université Paris Cité, 75015 Paris, France., Duong TN; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Phong TV; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Yen NT; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Anh HN; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Son TH; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Anh PT; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Amara F; Institut Pasteur, G5 Evolutionary Genomics of RNA Viruses, Université Paris Cité, 75015 Paris, France., Bigot T; Pathogen Discovery Laboratory, Institut Pasteur, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, Bioinformatics and Biostatistics Hub, Université Paris Cité, 75015 Paris, France., Munier S; Institut Pasteur, G5 Evolutionary Genomics of RNA Viruses, Université Paris Cité, 75015 Paris, France., Thong VD; Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology (VAST), Hanoi 70072, Vietnam., van der Werf S; Molecular Genetics of RNA Viruses Unit, Institut Pasteur, CNRS UMR 3569, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, National Reference Center for Respiratory Viruses, Université Paris Cité, 75015 Paris, France., Nam VS; National Institute of Hygiene and Epidemiology, Hanoi 100000, Vietnam., Eloit M; Pathogen Discovery Laboratory, Institut Pasteur, Université Paris Cité, 75015 Paris, France.; Institut Pasteur, The OIE Collaborating Center for the Detection and Identification in Humans of Emerging Animal Pathogens, Université Paris Cité, 75015 Paris, France.; Ecole Nationale Vétérinaire d'Alfort, University of Paris-Est, 77420 Maisons-Alfort, France.
المصدر: Viruses [Viruses] 2023 Sep 08; Vol. 15 (9). Date of Electronic Publication: 2023 Sep 08.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915 (Electronic) Linking ISSN: 19994915 NLM ISO Abbreviation: Viruses Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI
مواضيع طبية MeSH: Coronavirus*/genetics , Chiroptera* , Severe acute respiratory syndrome-related coronavirus* , Coronavirus Infections*/epidemiology , Coronavirus Infections*/veterinary, Humans ; Animals ; Vietnam/epidemiology ; Phylogeny ; Genotype ; Phenotype ; Pandemics
مستخلص: Bats are a major reservoir of zoonotic viruses, including coronaviruses. Since the emergence of SARS-CoV in 2002/2003 in Asia, important efforts have been made to describe the diversity of Coronaviridae circulating in bats worldwide, leading to the discovery of the precursors of epidemic and pandemic sarbecoviruses in horseshoe bats. We investigated the viral communities infecting horseshoe bats living in Northern Vietnam, and report here the first identification of sarbecoviruses in Rhinolophus thomasi and Rhinolophus siamensis bats. Phylogenetic characterization of seven strains of Vietnamese sarbecoviruses identified at least three clusters of viruses. Recombination and cross-species transmission between bats seemed to constitute major drivers of virus evolution. Vietnamese sarbecoviruses were mainly enteric, therefore constituting a risk of spillover for guano collectors or people visiting caves. To evaluate the zoonotic potential of these viruses, we analyzed in silico and in vitro the ability of their RBDs to bind to mammalian ACE2s and concluded that these viruses are likely restricted to their bat hosts. The workflow applied here to characterize the spillover potential of novel sarbecoviruses is of major interest for each time a new virus is discovered, in order to concentrate surveillance efforts on high-risk interfaces.
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فهرسة مساهمة: Keywords: Sarbecovirus; horseshoe bat; spillover; virus evolution
تواريخ الأحداث: Date Created: 20230928 Date Completed: 20230929 Latest Revision: 20231004
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC10536463
DOI: 10.3390/v15091897
PMID: 37766303
قاعدة البيانات: MEDLINE
الوصف
تدمد:1999-4915
DOI:10.3390/v15091897