دورية أكاديمية
Genome-Wide Identification and Expression Analysis of BnPP2C Gene Family in Response to Multiple Stresses in Ramie ( Boehmeria nivea L.).
العنوان: | Genome-Wide Identification and Expression Analysis of BnPP2C Gene Family in Response to Multiple Stresses in Ramie ( Boehmeria nivea L.). |
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المؤلفون: | Chen Y; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China.; College of Agriculture, Guangxi University, Nanning 530004, China., Zhao H; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Wang Y; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Qiu X; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Gao G; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Zhu A; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Chen P; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Wang X; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Chen K; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Chen J; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China., Chen P; College of Agriculture, Guangxi University, Nanning 530004, China., Chen J; Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410221, China.; National Breeding Center or Bast Fiber Crops, MARA, Changsha 410221, China. |
المصدر: | International journal of molecular sciences [Int J Mol Sci] 2023 Oct 18; Vol. 24 (20). Date of Electronic Publication: 2023 Oct 18. |
نوع المنشور: | Journal Article |
اللغة: | English |
بيانات الدورية: | Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE |
أسماء مطبوعة: | Original Publication: Basel, Switzerland : MDPI, [2000- |
مواضيع طبية MeSH: | Boehmeria*/genetics , Boehmeria*/metabolism, Transcriptome ; Plant Leaves/metabolism ; Promoter Regions, Genetic ; Gene Expression Regulation, Plant ; Plant Proteins/genetics ; Plant Proteins/metabolism |
مستخلص: | The protein phosphatase 2C ( PP2C ), a key regulator of the ABA signaling pathway, plays important roles in plant growth and development, hormone signaling, and abiotic stress response. Although the PP2C gene family has been identified in many species, systematic analysis was still relatively lacking in ramie ( Boehmeria nivea L.). In the present study, we identified 63 BnPP2C genes from the ramie genome, using bioinformatics analysis, and classified them into 12 subfamilies, and this classification was consistently supported by their gene structures and conserved motifs. In addition, we observed that the functional differentiation of the BnPP2C family of genes was restricted and that fragment replication played a major role in the amplification of the BnPP2C gene family. The promoter cis -regulatory elements of BnPP2C genes were mainly involved in light response regulation, phytohormone synthesis, transport and signaling, environmental stress response and plant growth and development regulation. We identified BnPP2C genes with tissue specificity, using ramie transcriptome data from different tissues, in rhizome leaves and bast fibers. The qRT-PCR results showed that the BnPP2C1 , BnPP2C26 and BnPP2C27 genes had a strong response to drought, high salt and ABA, and there were a large number of stress-responsive elements in the promoter region of BnPP2C1 and BnPP2C26 . The results suggested that BnPP2C1 and BnPP2C26 could be used as the candidate genes for drought and salt tolerance in ramie. These results provide a reference for further studies on the function of the PP2C gene and advance the development of the mechanism of ramie stress response, with a view to providing candidate genes for the molecular breeding of ramie for drought and salt tolerance. |
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معلومات مُعتمدة: | 2022RC1013 he Youth Talent Program of Hunan Province; CARS-16 the China Agriculture Research System for Bast and Leaf Fiber Crops; G2022051017L the Foreign Expert Project; ASTIP-IBFC-04 the Agriculture Science and Technology Innovation Project |
فهرسة مساهمة: | Keywords: abscisic acid (ABA); evolutionary analysis; expression patterns; protein phosphatase 2C (PP2C); ramie |
المشرفين على المادة: | 0 (Plant Proteins) |
تواريخ الأحداث: | Date Created: 20231028 Date Completed: 20231030 Latest Revision: 20231030 |
رمز التحديث: | 20231030 |
مُعرف محوري في PubMed: | PMC10607689 |
DOI: | 10.3390/ijms242015282 |
PMID: | 37894962 |
قاعدة البيانات: | MEDLINE |
تدمد: | 1422-0067 |
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DOI: | 10.3390/ijms242015282 |