دورية أكاديمية

The activity of engrailed imaginal disc enhancers is modulated epigenetically by chromatin and autoregulation.

التفاصيل البيبلوغرافية
العنوان: The activity of engrailed imaginal disc enhancers is modulated epigenetically by chromatin and autoregulation.
المؤلفون: Cheng Y; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, United States of America., Chan F; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, United States of America., Kassis JA; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, United States of America.
المصدر: PLoS genetics [PLoS Genet] 2023 Nov 15; Vol. 19 (11), pp. e1010826. Date of Electronic Publication: 2023 Nov 15 (Print Publication: 2023).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7404 (Electronic) Linking ISSN: 15537390 NLM ISO Abbreviation: PLoS Genet Subsets: MEDLINE
أسماء مطبوعة: Original Publication: San Francisco, CA : Public Library of Science, c2005-
مواضيع طبية MeSH: Drosophila Proteins*/genetics , Drosophila Proteins*/metabolism , Imaginal Discs*/metabolism, Animals ; Chromatin/genetics ; Chromatin/metabolism ; DNA/metabolism ; Drosophila/genetics ; Epigenesis, Genetic ; Gene Expression Regulation, Developmental ; Homeodomain Proteins/genetics ; Homeodomain Proteins/metabolism ; Homeostasis ; Transcription Factors/genetics ; Transcription Factors/metabolism
مستخلص: engrailed (en) encodes a homeodomain transcription factor crucial for the proper development of Drosophila embryos and adults. Like many developmental transcription factors, en expression is regulated by many enhancers, some of overlapping function, that drive expression in spatially and temporally restricted patterns. The en embryonic enhancers are located in discrete DNA fragments that can function correctly in small reporter transgenes. In contrast, the en imaginal disc enhancers (IDEs) do not function correctly in small reporter transgenes. En is expressed in the posterior compartment of wing imaginal discs; in contrast, small IDE-reporter transgenes are expressed mainly in the anterior compartment. We found that En binds to the IDEs and suggest that it may directly repress IDE function and modulate En expression levels. We identified two en IDEs, O and S. Deletion of either of these IDEs from a 79kb HA-en rescue transgene (HAen79) caused a loss-of-function en phenotype when the HAen79 transgene was the sole source of En. In contrast, flies with a deletion of the same IDEs from an endogenous en gene had no phenotype, suggesting a resiliency not seen in the HAen79 rescue transgene. Inserting a gypsy insulator in HAen79 between en regulatory DNA and flanking sequences strengthened the activity of HAen79, giving better function in both the ON and OFF transcriptional states. Altogether our data suggest that the en IDEs stimulate expression in the entire imaginal disc, and that the ON/OFF state is set by epigenetic memory set by the embryonic enhancers. This epigenetic regulation is similar to that of the Ultrabithorax IDEs and we suggest that the activity of late-acting enhancers in other genes may be similarly regulated.
Competing Interests: The authors declare no competing interests.
(Copyright: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.)
التعليقات: Update of: bioRxiv. 2023 Jun 16;:. (PMID: 37502849)
References: Science. 2006 Dec 15;314(5806):1747-51. (PMID: 17138868)
J Biol Chem. 2006 Sep 29;281(39):29064-75. (PMID: 16887811)
Proc Natl Acad Sci U S A. 1981 Feb;78(2):1095-9. (PMID: 6821526)
Curr Biol. 2010 Sep 14;20(17):1562-7. (PMID: 20797865)
Mech Dev. 1994 Dec;48(3):255-66. (PMID: 7893606)
Development. 1995 Oct;121(10):3447-56. (PMID: 7588077)
Proc Natl Acad Sci U S A. 2008 Jul 15;105(28):9715-20. (PMID: 18621688)
Genetics. 1995 Dec;141(4):1439-50. (PMID: 8601485)
Development. 1995 Oct;121(10):3359-69. (PMID: 7588069)
Genes Dev. 2017 Mar 15;31(6):590-602. (PMID: 28381411)
Nature. 2018 Feb 8;554(7691):239-243. (PMID: 29420474)
Cell. 1985 Nov;43(1):59-69. (PMID: 3935318)
Nat Genet. 2006 Jun;38(6):700-5. (PMID: 16732288)
PLoS Genet. 2021 Apr 26;17(4):e1009536. (PMID: 33901190)
Genetics. 1972 Sep;72(1):87-104. (PMID: 4627463)
EMBO J. 1996 Sep 2;15(17):4713-22. (PMID: 8887562)
PLoS Genet. 2016 Jul 28;12(7):e1006200. (PMID: 27466807)
Genetics. 2017 Aug;206(4):1699-1725. (PMID: 28778878)
Genetics. 2020 Nov;216(3):689-700. (PMID: 32948625)
Nat Rev Genet. 2021 May;22(5):324-336. (PMID: 33442000)
Genetics. 2020 Sep;216(1):1-26. (PMID: 32878914)
PLoS Genet. 2019 Oct 7;15(10):e1008444. (PMID: 31589607)
Development. 1993 Jan;117(1):387-99. (PMID: 7900988)
PLoS Genet. 2009 Sep;5(9):e1000633. (PMID: 19730678)
Nature. 1975 Jun 19;255(5510):614-7. (PMID: 1134551)
Dev Cell. 2019 Nov 4;51(3):341-356.e7. (PMID: 31607649)
Elife. 2014 Jul 31;3:e02833. (PMID: 25082344)
Fly (Austin). 2014;8(1):52-7. (PMID: 24141137)
PLoS One. 2015 Mar 20;10(3):e0121239. (PMID: 25793870)
Mech Dev. 2000 Jul;95(1-2):89-99. (PMID: 10906453)
EMBO J. 1991 Nov;10(11):3147-55. (PMID: 1680676)
Genes Dev. 1992 Oct;6(10):1865-73. (PMID: 1327958)
G3 (Bethesda). 2020 May 4;10(5):1541-1551. (PMID: 32122961)
Genetics. 1998 Jan;148(1):331-9. (PMID: 9475743)
Development. 1996 Oct;122(10):3141-50. (PMID: 8898227)
Nature. 2010 Jul 22;466(7305):490-3. (PMID: 20512118)
Cell. 2017 Sep 21;171(1):34-57. (PMID: 28938122)
Development. 1988 Dec;104(4):713-20. (PMID: 2908325)
Development. 1992 Nov;116(3):805-10. (PMID: 1363229)
Cell Rep. 2012 Oct 25;2(4):1014-24. (PMID: 23063361)
PLoS Genet. 2019 May 10;15(5):e1008152. (PMID: 31075100)
Genes Dev. 1987 Mar;1(1):19-28. (PMID: 2892756)
Sci Adv. 2019 Jan 09;5(1):eaau9739. (PMID: 30662949)
EMBO J. 2007 Sep 19;26(18):4078-88. (PMID: 17762866)
Dev Biol. 2014 Nov 1;395(1):131-43. (PMID: 25172431)
Genetics. 1999 Oct;153(2):787-98. (PMID: 10511558)
Genetics. 1996 Mar;142(3):893-906. (PMID: 8849895)
Development. 2008 Oct;135(19):3219-28. (PMID: 18715947)
Elife. 2016 May 05;5:. (PMID: 27146892)
المشرفين على المادة: 0 (Chromatin)
9007-49-2 (DNA)
0 (Drosophila Proteins)
0 (Homeodomain Proteins)
0 (Transcription Factors)
0 (En protein, Drosophila)
تواريخ الأحداث: Date Created: 20231115 Date Completed: 20231204 Latest Revision: 20231204
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC10686433
DOI: 10.1371/journal.pgen.1010826
PMID: 37967127
قاعدة البيانات: MEDLINE
الوصف
تدمد:1553-7404
DOI:10.1371/journal.pgen.1010826