دورية أكاديمية
أعرض في EDS

Complete genome sequence analysis of the multidrug resistant Aeromonas veronii isolated for the first time from stinging catfish (Shing fish) in Bangladesh.

التفاصيل البيبلوغرافية
العنوان: Complete genome sequence analysis of the multidrug resistant Aeromonas veronii isolated for the first time from stinging catfish (Shing fish) in Bangladesh.
المؤلفون: Rahman MM; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Sadekuzzaman M; Central Disease Investigation Laboratory, Department of Livestock Services, Dhaka, Bangladesh., Rahman MA; Bangladesh Fisheries Research Institute, Mymensingh, Bangladesh., Siddique MP; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Uddin MA; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Haque ME; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Chowdhury MGA; Central Disease Investigation Laboratory, Department of Livestock Services, Dhaka, Bangladesh., Khasruzzaman AKM; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Rahman MT; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Hossain MT; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh., Islam MA; Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.
المصدر: Journal of advanced veterinary and animal research [J Adv Vet Anim Res] 2023 Sep 30; Vol. 10 (3), pp. 570-578. Date of Electronic Publication: 2023 Sep 30 (Print Publication: 2023).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Network for the Veterinarians of Bangladesh Country of Publication: Bangladesh NLM ID: 101647585 Publication Model: eCollection Cited Medium: Internet ISSN: 2311-7710 (Electronic) Linking ISSN: 23117710 NLM ISO Abbreviation: J Adv Vet Anim Res Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Mymensingh : Network for the Veterinarians of Bangladesh, [2014]-
مستخلص: Objective: Whole genome sequencing (WGS) of Aeromonas veronii Alim_AV_1000 isolated from ulcerative lesions of Shing fish (stringing catfish; Heteropneustes fossilis ) was performed during the outbreak year 2021.
Materials and Methods: Using next-generation sequencing (Illumina) technology, WGS was accomplished, resulting in the sequencing, assembly, and analysis of the entire genome of the A. veronii strain. Moreover, the genomic features, virulence factors, antimicrobial resistome, and phylogenetic analysis for the molecular evolution of this strain were also examined.
Results: The genome size of the A. veronii Alim_AV_1000 strain was 4,494,515 bp, with an average G+C content of 58.87%. Annotation revealed the known transporters and genes linked to virulence, drug targets, and antimicrobial resistance.
Conclusion: The findings of the phylogenetic analysis revealed that the strain of the present study has a close relationship with the China strain TH0426 and strain B56. This study provides novel information on A. veronii isolated from Shing fish in Bangladesh.
Competing Interests: The authors confirmed no competing interests.
(Copyright: © Journal of Advanced Veterinary and Animal Research.)
References: Nucleic Acids Res. 2017 Jan 4;45(D1):D535-D542. (PMID: 27899627)
Front Microbiol. 2019 Jun 28;10:1484. (PMID: 31316495)
PLoS One. 2010 Jun 25;5(6):e11147. (PMID: 20593022)
Vet Microbiol. 2009 Apr 14;136(1-2):180-3. (PMID: 19042097)
One Health Outlook. 2020 Feb 18;2:3. (PMID: 33829127)
Nat Rev Microbiol. 2012 Apr 02;10(5):336-51. (PMID: 22466878)
BMC Genomics. 2022 Feb 28;23(1):166. (PMID: 35227192)
PLoS One. 2019 Aug 29;14(8):e0221018. (PMID: 31465454)
Appl Microbiol Biotechnol. 2010 Sep;88(2):451-9. (PMID: 20694794)
Microb Drug Resist. 2019 Sep;25(7):1041-1049. (PMID: 30994417)
Nucleic Acids Res. 2019 Jan 8;47(D1):D687-D692. (PMID: 30395255)
Genome Biol. 2016 Jun 20;17(1):132. (PMID: 27323842)
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7. (PMID: 15034147)
J Bacteriol. 2011 Jul;193(13):3389-90. (PMID: 21551296)
Front Microbiol. 2016 Feb 08;7:118. (PMID: 26903996)
Int J Mol Sci. 2016 Apr 01;17(4):496. (PMID: 27043558)
Am J Clin Pathol. 1966 Apr;45(4):493-6. (PMID: 5325707)
Pathogens. 2022 Mar 23;11(4):. (PMID: 35456060)
Bioinformatics. 2014 May 1;30(9):1312-3. (PMID: 24451623)
J Biol Methods. 2019 Mar 15;6(1):e110. (PMID: 31453259)
J Glob Antimicrob Resist. 2021 Dec;27:118-122. (PMID: 34508865)
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21. (PMID: 27141966)
فهرسة مساهمة: Keywords: Aeromonas veronii; antimicrobial resistance; fish; phylogeny; whole genome
تواريخ الأحداث: Date Created: 20231116 Latest Revision: 20231117
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC10636080
DOI: 10.5455/javar.2023.j711
PMID: 37969805
قاعدة البيانات: MEDLINE
الوصف
تدمد:2311-7710
DOI:10.5455/javar.2023.j711