دورية أكاديمية

Molecular Characterisation of Faecal Bacterial Assemblages Among Four Species of Syntopic Odonates.

التفاصيل البيبلوغرافية
العنوان: Molecular Characterisation of Faecal Bacterial Assemblages Among Four Species of Syntopic Odonates.
المؤلفون: Morrill A; Department of Biology, Carleton University, Ottawa, Ontario, Canada., Forbes MR; Department of Biology, Carleton University, Ottawa, Ontario, Canada., Vesterinen EJ; Department of Biology, University of Turku, Turku, Finland., Tamminen M; Department of Biology, University of Turku, Turku, Finland., Sääksjärvi IE; Biodiversity Unit, University of Turku, Turku, Finland., Kaunisto KM; Biodiversity Unit, University of Turku, Turku, Finland. kari.kaunisto@utu.fi.
المصدر: Microbial ecology [Microb Ecol] 2023 Dec 18; Vol. 87 (1), pp. 16. Date of Electronic Publication: 2023 Dec 18.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Springer-Verlag Country of Publication: United States NLM ID: 7500663 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-184X (Electronic) Linking ISSN: 00953628 NLM ISO Abbreviation: Microb Ecol Subsets: MEDLINE
أسماء مطبوعة: Original Publication: New York, Springer-Verlag.
مواضيع طبية MeSH: Bacteria*/genetics , Odonata*, Animals ; RNA, Ribosomal, 16S/genetics ; Ecology ; Feces ; Host Specificity
مستخلص: Factors such as host species, phylogeny, diet, and both timing and location of sampling are thought to influence the composition of gut-associated bacteria in insects. In this study, we compared the faecal-associated bacterial taxa for three Coenagrion and one Enallagma damselfly species. We expected high overlap in representation of bacterial taxa due to the shared ecology and diet of these species. Using metabarcoding based on the 16S rRNA gene, we identified 1513 sequence variants, representing distinct bacterial 'taxa'. Intriguingly, the damselfly species showed somewhat different magnitudes of richness of ZOTUs, ranging from 480 to 914 ZOTUs. In total, 921 (or 60.8% of the 1513) distinct ZOTUs were non-shared, each found only in one species, and then most often in only a single individual. There was a surfeit of these non-shared incidental ZOTUs in the Enallagma species accounting for it showing the highest bacterial richness and accounting for a sample-wide pattern of more single-species ZOTUs than expected, based on comparisons to the null model. Future studies should address the extent to which faecal bacteria represent non-incidental gut bacteria and whether abundant and shared taxa are true gut symbionts. Pictures of odonates adopted from Norske Art databank under Creative Commons License (CC BY 4.0).
(© 2023. The Author(s).)
References: Curr Microbiol. 2020 Sep;77(9):1976-1986. (PMID: 32535651)
Annu Rev Entomol. 2023 Aug 16;:. (PMID: 37585608)
J Invertebr Pathol. 2012 Nov;111(3):211-6. (PMID: 22935249)
AMB Express. 2016 Dec;6(1):63. (PMID: 27576896)
Mol Ecol. 2022 Feb;31(3):723-735. (PMID: 34837439)
Curr Opin Insect Sci. 2020 Oct;41:33-39. (PMID: 32634703)
Sci Rep. 2021 Feb 26;11(1):4798. (PMID: 33637887)
Insect Biochem Mol Biol. 2015 Dec;67:15-20. (PMID: 25982023)
Proc Natl Acad Sci U S A. 2018 Jun 19;115(25):6506-6511. (PMID: 29784790)
Front Microbiol. 2020 Aug 12;11:1965. (PMID: 32903451)
Ecol Evol. 2018 Oct 12;8(22):10914-10937. (PMID: 30519417)
Nature. 2012 May 02;486(7401):105-8. (PMID: 22678289)
Mol Ecol. 2016 Apr;25(7):1581-94. (PMID: 26841188)
Med Vet Entomol. 2014 Dec;28(4):345-54. (PMID: 24805263)
Oecologia. 2019 Sep;191(1):141-152. (PMID: 31367913)
PLoS One. 2017 Mar 30;12(3):e0174754. (PMID: 28358907)
J Exp Biol. 2021 Jan 28;224(Pt 2):. (PMID: 33509844)
Nature. 2011 Mar 3;471(7336):51-7. (PMID: 21368823)
PLoS One. 2013 Apr 22;8(4):e61217. (PMID: 23630581)
Environ Entomol. 2018 Jun 6;47(3):638-645. (PMID: 29566143)
Front Genet. 2021 Sep 07;12:706907. (PMID: 34557218)
Front Microbiol. 2018 Mar 27;9:556. (PMID: 29636736)
Comput Struct Biotechnol J. 2021 Aug 17;19:4658-4668. (PMID: 34504661)
Ecol Evol. 2017 Sep 14;7(20):8588-8598. (PMID: 29075474)
Genome Biol. 2014;15(12):550. (PMID: 25516281)
Philos Trans R Soc Lond B Biol Sci. 1994 Jul 29;345(1311):101-18. (PMID: 7972351)
Science. 2010 Jul 9;329(5988):212-5. (PMID: 20616278)
Glob Chang Biol. 2020 Nov;26(11):6276-6295. (PMID: 32914511)
Bioinformatics. 2012 Jul 15;28(14):1823-9. (PMID: 22556368)
Insect Sci. 2020 Jun;27(3):392-403. (PMID: 31207108)
Springerplus. 2013 Nov 15;2:609. (PMID: 24324923)
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6. (PMID: 23193283)
PeerJ. 2021 Dec 17;9:e12634. (PMID: 35003931)
PeerJ. 2016 Oct 18;4:e2584. (PMID: 27781170)
FEMS Microbiol Ecol. 2016 Sep;92(9):. (PMID: 27387908)
Microorganisms. 2020 Jan 28;8(2):. (PMID: 32012869)
Microb Ecol. 2015 Nov;70(4):1012-23. (PMID: 25985770)
PeerJ. 2019 Nov 18;7:e8058. (PMID: 31763071)
PLoS One. 2010 Mar 10;5(3):e9490. (PMID: 20224823)
PeerJ. 2015 Aug 27;3:e1218. (PMID: 26336647)
FEMS Microbiol Rev. 2013 Sep;37(5):699-735. (PMID: 23692388)
Front Microbiol. 2021 Apr 14;12:513962. (PMID: 33935980)
J Anim Ecol. 2020 Jun;89(6):1365-1374. (PMID: 32124439)
فهرسة مساهمة: Keywords: Bacterial assemblages; Biodiversity; Damselfly; Faecal DNA; Metabarcoding; Microbiome
المشرفين على المادة: 0 (RNA, Ribosomal, 16S)
تواريخ الأحداث: Date Created: 20231218 Date Completed: 20231219 Latest Revision: 20231221
رمز التحديث: 20231221
مُعرف محوري في PubMed: PMC10728244
DOI: 10.1007/s00248-023-02328-1
PMID: 38108886
قاعدة البيانات: MEDLINE
الوصف
تدمد:1432-184X
DOI:10.1007/s00248-023-02328-1