دورية أكاديمية
أعرض في EDS

Host species and geography impact bee-associated RNA virus communities with evidence for isolation by distance in viral populations.

التفاصيل البيبلوغرافية
العنوان: Host species and geography impact bee-associated RNA virus communities with evidence for isolation by distance in viral populations.
المؤلفون: Robinson CRP; Department of Biology, Indiana University, Bloomington, IN 47405, United States., Dolezal AG; Department of Entomology, University of Illinois Urbana-Champaign, Urbana, IL 61801, United States., Newton ILG; Department of Biology, Indiana University, Bloomington, IN 47405, United States.
المصدر: ISME communications [ISME Commun] 2024 Jan 10; Vol. 4 (1), pp. ycad003. Date of Electronic Publication: 2024 Jan 10 (Print Publication: 2024).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE
أسماء مطبوعة: Publication: 3 2024- : Oxford : Oxford University Press
Original Publication: [London] : Springer Nature on behalf of the International Society for Microbial Ecology, [2021]-
مستخلص: Virus symbionts are important mediators of ecosystem function, yet we know little of their diversity and ecology in natural populations. The alarming decline of pollinating insects in many regions of the globe, especially the European honey bee, Apis mellifera , has been driven in part by worldwide transmission of virus pathogens. Previous work has examined the transmission of known honey bee virus pathogens to wild bee populations, but only a handful of studies have investigated the native viromes associated with wild bees, limiting epidemiological predictors associated with viral pathogenesis. Further, variation among different bee species might have important consequences in the acquisition and maintenance of bee-associated virome diversity. We utilized comparative metatranscriptomics to develop a baseline description of the RNA viromes associated with wild bee pollinators and to document viral diversity, community composition, and structure. Our sampling includes five wild-caught, native bee species that vary in social behavior as well as managed honey bees. We describe 26 putatively new RNA virus species based on RNA-dependent RNA polymerase phylogeny and show that each sampled bee species was associated with a specific virus community composition, even among sympatric populations of distinct host species. From 17 samples of a single host species, we recovered a single virus species despite over 600 km of distance between host populations and found strong evidence for isolation by distance in associated viral populations. Our work adds to the small number of studies examining viral prevalence and community composition in wild bees.
Competing Interests: None declared.
(© The Author(s) 2024. Published by Oxford University Press on behalf of the International Society for Microbial Ecology.)
References: Oecologia. 2017 Jun;184(2):305-315. (PMID: 28361244)
Nat Biotechnol. 2019 Aug;37(8):907-915. (PMID: 31375807)
Virology. 2015 May;479-480:46-51. (PMID: 25824477)
Crit Rev Biochem Mol Biol. 1993;28(5):375-430. (PMID: 8269709)
Science. 2013 Mar 29;339(6127):1611-5. (PMID: 23449999)
Virus Evol. 2020 Dec 30;7(1):veaa100. (PMID: 33505708)
Science. 2013 Mar 29;339(6127):1608-11. (PMID: 23449997)
Cell. 2019 May 16;177(5):1109-1123.e14. (PMID: 31031001)
PLoS Pathog. 2014 Jul 31;10(7):e1004261. (PMID: 25079600)
Arch Virol. 2017 Sep;162(9):2875-2879. (PMID: 28477174)
Bioinformatics. 2012 Dec 1;28(23):3150-2. (PMID: 23060610)
Nat Rev Microbiol. 2016 Jun;14(6):374-84. (PMID: 27140688)
Front Microbiol. 2017 Oct 25;8:2097. (PMID: 29118750)
J Invertebr Pathol. 1999 Jan;73(1):101-6. (PMID: 9878295)
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3321-3. (PMID: 4519626)
Mol Biol Evol. 2013 Apr;30(4):772-80. (PMID: 23329690)
R Soc Open Sci. 2018 Jul 11;5(7):180369. (PMID: 30109092)
Nucleic Acids Res. 2007 Jan;35(Database issue):D61-5. (PMID: 17130148)
Science. 2017 Apr 7;356(6333):92-95. (PMID: 28336562)
J Invertebr Pathol. 2017 Jul;147:37-50. (PMID: 27793741)
Nat Biotechnol. 2021 May;39(5):578-585. (PMID: 33349699)
Oecologia. 2000 Feb;122(2):288-296. (PMID: 28308384)
Bioinformatics. 2014 Aug 1;30(15):2114-20. (PMID: 24695404)
Proc Natl Acad Sci U S A. 2023 Jan 31;120(5):e2211223120. (PMID: 36689649)
Insects. 2017 Mar 07;8(1):. (PMID: 28272333)
Nat Ecol Evol. 2023 Apr;7(4):557-569. (PMID: 36941345)
J Anim Ecol. 2015 May;84(3):615-624. (PMID: 25646973)
Adv Virus Res. 2013;86:149-76. (PMID: 23498906)
Science. 2016 Feb 5;351(6273):594-7. (PMID: 26912700)
Proc Biol Sci. 2015 Mar 22;282(1803):20142773. (PMID: 25673681)
Proc Biol Sci. 2006 Jul 7;273(1594):1643-9. (PMID: 16769636)
Proc Biol Sci. 2007 Feb 7;274(1608):303-13. (PMID: 17164193)
Adv Virus Res. 2018;101:251-291. (PMID: 29908591)
PeerJ. 2022 Oct 13;10:e14055. (PMID: 36258794)
Commun Biol. 2022 Jun 17;5(1):603. (PMID: 35715496)
Trends Ecol Evol. 2010 Jun;25(6):345-53. (PMID: 20188434)
Bioinformatics. 2016 Oct 1;32(19):3047-8. (PMID: 27312411)
PeerJ. 2017 Jan 11;5:e2836. (PMID: 28097056)
Appl Environ Microbiol. 2013 Mar;79(6):1803-12. (PMID: 23291551)
Nucleic Acids Res. 2012 Dec;40(22):11189-201. (PMID: 23066108)
Bioinformatics. 2009 Aug 1;25(15):1972-3. (PMID: 19505945)
Annu Rev Virol. 2019 Sep 29;6(1):49-69. (PMID: 31185188)
Sci Rep. 2021 Feb 4;11(1):2993. (PMID: 33542351)
Bioinformatics. 2021 Dec 22;38(1):1-8. (PMID: 34406356)
Mol Ecol. 2011 Feb;20(3):619-28. (PMID: 21175905)
Front Ecol Environ. 2015 Oct;13(8):425-434. (PMID: 28077932)
PLoS One. 2016 Nov 10;11(11):e0166190. (PMID: 27832169)
J Gen Virol. 2017 Apr;98(4):527-528. (PMID: 28382900)
Appl Environ Microbiol. 2022 Jul 12;88(13):e0020322. (PMID: 35758673)
Proc Biol Sci. 2015 Aug 22;282(1813):20151371. (PMID: 26246556)
Mol Phylogenet Evol. 2012 Dec;65(3):926-39. (PMID: 22982437)
Nat Methods. 2017 Jun;14(6):587-589. (PMID: 28481363)
Front Microbiol. 2021 Apr 22;12:650747. (PMID: 33967987)
PLoS One. 2010 Dec 22;5(12):e14357. (PMID: 21203504)
J Microbiol. 2015 Mar;53(3):181-92. (PMID: 25732739)
PeerJ. 2019 Feb 20;6:e6216. (PMID: 30809424)
PLoS One. 2019 Sep 18;14(9):e0221800. (PMID: 31532764)
PeerJ. 2017 Sep 21;5:e3817. (PMID: 28948103)
Mol Biol Evol. 2020 Aug 1;37(8):2461. (PMID: 32556291)
J Gen Virol. 2017 Aug;98(8):1999-2000. (PMID: 28786782)
BMC Bioinformatics. 2009 Dec 15;10:421. (PMID: 20003500)
Front Microbiol. 2018 Feb 14;9:177. (PMID: 29491849)
J Gen Virol. 2015 Feb;96(Pt 2):431-439. (PMID: 25351517)
PeerJ. 2014 Aug 12;2:e522. (PMID: 25165632)
فهرسة مساهمة: Keywords: RNA viral ecology; host-associated symbionts; isolation-by-distance; metatranscriptomics
تواريخ الأحداث: Date Created: 20240202 Latest Revision: 20240315
رمز التحديث: 20240315
مُعرف محوري في PubMed: PMC10833078
DOI: 10.1093/ismeco/ycad003
PMID: 38304079
قاعدة البيانات: MEDLINE
الوصف
تدمد:2730-6151
DOI:10.1093/ismeco/ycad003