دورية أكاديمية
Biodiversity of autotrophic euglenids based on the group specific DNA metabarcoding approach.
| العنوان: | Biodiversity of autotrophic euglenids based on the group specific DNA metabarcoding approach. |
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| المؤلفون: | Jankowska K; University of Warsaw, Faculty of Biology, Biological and Chemical Research Centre, ul. Żwirki i Wigury 101, 02-089 Warsaw, Poland., Łukomska-Kowalczyk M; University of Warsaw, Faculty of Biology, Biological and Chemical Research Centre, ul. Żwirki i Wigury 101, 02-089 Warsaw, Poland. Electronic address: m.lukomskako@uw.edu.pl., Milanowski R; University of Warsaw, Faculty of Biology, Biological and Chemical Research Centre, ul. Żwirki i Wigury 101, 02-089 Warsaw, Poland., Fells A; University of Warsaw, Faculty of Biology, Biological and Chemical Research Centre, ul. Żwirki i Wigury 101, 02-089 Warsaw, Poland., Zakryś B; University of Warsaw, Faculty of Biology, Biological and Chemical Research Centre, ul. Żwirki i Wigury 101, 02-089 Warsaw, Poland. |
| المصدر: | Protist [Protist] 2024 Jun; Vol. 175 (3), pp. 126024. Date of Electronic Publication: 2024 Mar 04. |
| نوع المنشور: | Journal Article; Research Support, Non-U.S. Gov't |
| اللغة: | English |
| بيانات الدورية: | Publisher: G. Fischer Country of Publication: Germany NLM ID: 9806488 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1618-0941 (Electronic) Linking ISSN: 14344610 NLM ISO Abbreviation: Protist Subsets: MEDLINE |
| أسماء مطبوعة: | Original Publication: Jena : G. Fischer, 1998- |
| مواضيع طبية MeSH: | DNA Barcoding, Taxonomic* , Biodiversity* , Euglenida*/genetics , Euglenida*/classification, Poland ; RNA, Ribosomal, 18S/genetics ; Phylogeny ; DNA, Protozoan/genetics ; Autotrophic Processes ; DNA, Ribosomal/genetics |
| مستخلص: | This study reports a comprehensive analysis of photoautotrophic euglenids' distribution and biodiversity in 16 small water bodies of various types (including fish ponds, field ponds, rural ponds and park ponds) located in three regions of Poland: Masovia, Masuria and Pomerania during a period of three years. By employing a euglenid specific barcode marker and a curated database of V2 18S rDNA sequences it was possible to identify 97.7 % of euglenid reads at species level. A total of 152 species classified in 13 genera were identified. The number of euglenid species found in one pond varied from 40 to 102. The most common species were Euglena agilis and Euglenaria caudata, found in every analysed waterbody. The highest number of observed species belonged to Trachelomonas and Phacus. Certain species exhibited a tendency to coexist, suggesting the presence of distinct species assemblages. Among them, the most distinctive cluster was associated with water bodies located in the Masuria region, characterized also by the greatest species richness, including many very rare species: Euglenaformis chlorophoenicea, Lepocinclis autumnalis, L. marssonii, Trachelomonas eurystoma, T. manschurica, T. mucosa, T. zuberi, T. zuberi var. nepos. Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. (Copyright © 2024 The Authors. Published by Elsevier GmbH.. All rights reserved.) |
| فهرسة مساهمة: | Keywords: Autotrophic euglenids; Biodiversity; DNA metabarcoding; V2 18S rDNA |
| المشرفين على المادة: | 0 (RNA, Ribosomal, 18S) 0 (DNA, Protozoan) 0 (DNA, Ribosomal) |
| تواريخ الأحداث: | Date Created: 20240307 Date Completed: 20240511 Latest Revision: 20240511 |
| رمز التحديث: | 20240512 |
| DOI: | 10.1016/j.protis.2024.126024 |
| PMID: | 38452550 |
| قاعدة البيانات: | MEDLINE |
Full Text Finder | تدمد: | 1618-0941 |
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| DOI: | 10.1016/j.protis.2024.126024 |