دورية أكاديمية

An immunohistochemical atlas of necroptotic pathway expression.

التفاصيل البيبلوغرافية
العنوان: An immunohistochemical atlas of necroptotic pathway expression.
المؤلفون: Chiou S; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Al-Ani AH; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia.; Royal Melbourne Hospital, Parkville, Australia., Pan Y; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Patel KM; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Kong IY; Pediatric Hematology/Oncology, Weill Cornell Medical College, New York, USA., Whitehead LW; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Light A; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Young SN; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Barrios M; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Sargeant C; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Rajasekhar P; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Zhu L; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Hempel A; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Lin A; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Rickard JA; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; Austin Hospital, Heidelberg, Australia., Hall C; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Gangatirkar P; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Yip RK; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Cawthorne W; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Jacobsen AV; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Horne CR; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Martin KR; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Ioannidis LJ; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Hansen DS; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia.; Monash Biomedicine Discovery Institute, Department of Microbiology, Monash University, Clayton, Australia., Day J; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia.; Royal Melbourne Hospital, Parkville, Australia., Wicks IP; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Law C; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Ritchie ME; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Bowden R; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Hildebrand JM; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., O'Reilly LA; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Silke J; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Giulino-Roth L; Pediatric Hematology/Oncology, Weill Cornell Medical College, New York, USA., Tsui E; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia., Rogers KL; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Hawkins ED; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia., Christensen B; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia.; University of Melbourne, Parkville, Australia.; Royal Melbourne Hospital, Parkville, Australia., Murphy JM; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia. jamesm@wehi.edu.au.; University of Melbourne, Parkville, Australia. jamesm@wehi.edu.au.; Drug Discovery Biology, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, Australia. jamesm@wehi.edu.au., Samson AL; Walter and Eliza Hall Institute of Medical Research, Parkville, Australia. samson.a@wehi.edu.au.; University of Melbourne, Parkville, Australia. samson.a@wehi.edu.au.
المصدر: EMBO molecular medicine [EMBO Mol Med] 2024 Jul; Vol. 16 (7), pp. 1717-1749. Date of Electronic Publication: 2024 May 15.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: EMBO Press Country of Publication: Germany NLM ID: 101487380 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1757-4684 (Electronic) Linking ISSN: 17574676 NLM ISO Abbreviation: EMBO Mol Med Subsets: MEDLINE
أسماء مطبوعة: Publication: 2024- : Heidelberg : EMBO Press
Original Publication: Chichester, West Sussex : Wiley-Blackwell
مواضيع طبية MeSH: Necroptosis* , Receptor-Interacting Protein Serine-Threonine Kinases*/metabolism , Receptor-Interacting Protein Serine-Threonine Kinases*/genetics , Immunohistochemistry*/methods, Animals ; Humans ; Mice ; Protein Kinases/metabolism ; Protein Kinases/genetics ; Caspase 8/metabolism ; Signal Transduction ; Mice, Inbred C57BL
مستخلص: Necroptosis is a lytic form of regulated cell death reported to contribute to inflammatory diseases of the gut, skin and lung, as well as ischemic-reperfusion injuries of the kidney, heart and brain. However, precise identification of the cells and tissues that undergo necroptotic cell death in vivo has proven challenging in the absence of robust protocols for immunohistochemical detection. Here, we provide automated immunohistochemistry protocols to detect core necroptosis regulators - Caspase-8, RIPK1, RIPK3 and MLKL - in formalin-fixed mouse and human tissues. We observed surprising heterogeneity in protein expression within tissues, whereby short-lived immune barrier cells were replete with necroptotic effectors, whereas long-lived cells lacked RIPK3 or MLKL expression. Local changes in the expression of necroptotic effectors occurred in response to insults such as inflammation, dysbiosis or immune challenge, consistent with necroptosis being dysregulated in disease contexts. These methods will facilitate the precise localisation and evaluation of necroptotic signaling in vivo.
(© 2024. The Author(s).)
References: Gut. 2015 Apr;64(4):601-10. (PMID: 25379949)
J Exp Med. 2000 Feb 7;191(3):475-84. (PMID: 10662793)
Cell Death Differ. 2016 Jul;23(7):1185-97. (PMID: 26868910)
Gut. 2017 Jan;66(1):50-58. (PMID: 26475633)
Mol Cell. 2014 Apr 10;54(1):133-146. (PMID: 24703947)
Nat Cell Biol. 2022 Apr;24(4):471-482. (PMID: 35256774)
J Infect Dis. 2000 Sep;182(3):873-81. (PMID: 10950783)
J Biol Chem. 2013 Jun 7;288(23):16247-16261. (PMID: 23612963)
Cell Host Microbe. 2010 Apr 22;7(4):302-313. (PMID: 20413098)
Cell Rep. 2019 Nov 19;29(8):2257-2269.e6. (PMID: 31747599)
Proc Natl Acad Sci U S A. 2020 Mar 3;117(9):4959-4970. (PMID: 32071228)
Nat Commun. 2023 Sep 28;14(1):6046. (PMID: 37770424)
Cardiovasc Res. 2014 Jul 15;103(2):206-16. (PMID: 24920296)
Sci Signal. 2021 Feb 02;14(668):. (PMID: 33531383)
Proc Natl Acad Sci U S A. 2022 Oct 11;119(41):e2207240119. (PMID: 36191211)
Science. 2015 Jan 23;347(6220):1260419. (PMID: 25613900)
Front Med (Lausanne). 2022 Jan 27;8:816281. (PMID: 35155486)
Bioinformatics. 2014 Apr 1;30(7):923-30. (PMID: 24227677)
Nat Commun. 2020 Jun 19;11(1):3060. (PMID: 32561735)
Cell. 2014 May 22;157(5):1175-88. (PMID: 24813849)
Nat Rev Gastroenterol Hepatol. 2015 Apr;12(4):205-17. (PMID: 25732745)
Immunity. 2013 Sep 19;39(3):443-53. (PMID: 24012422)
Nat Commun. 2020 Dec 11;11(1):6364. (PMID: 33311474)
Protein Cell. 2021 Nov;12(11):858-876. (PMID: 33389663)
iScience. 2021 Mar 17;24(4):102320. (PMID: 33870135)
J Biol Chem. 2013 Oct 25;288(43):31268-79. (PMID: 24019532)
Future Med Chem. 2021 May;13(9):817-837. (PMID: 33845591)
Nature. 2011 Sep 14;477(7364):335-9. (PMID: 21921917)
Nat Metab. 2019 Sep;1(9):899-911. (PMID: 31535084)
Cell. 2018 Nov 1;175(4):1156-1167.e15. (PMID: 30270040)
Cell Death Differ. 2021 Jul;28(7):2126-2144. (PMID: 33589776)
Mol Cell. 2019 Feb 7;73(3):413-428.e7. (PMID: 30598363)
Cell Death Differ. 2023 Apr;30(4):1059-1071. (PMID: 36755069)
Nat Biotechnol. 2019 Aug;37(8):907-915. (PMID: 31375807)
Immunity. 2011 Dec 23;35(6):908-18. (PMID: 22195746)
Mol Cell Proteomics. 2013 Jun;12(6):1709-22. (PMID: 23436904)
Cell. 2021 Jun 24;184(13):3573-3587.e29. (PMID: 34062119)
Dig Liver Dis. 2017 Nov;49(11):1201-1210. (PMID: 28844856)
Proc Natl Acad Sci U S A. 2020 Aug 4;117(31):18771-18779. (PMID: 32690704)
J Exp Med. 2017 Dec 4;214(12):3687-3705. (PMID: 29089374)
Nat Methods. 2012 Jun 28;9(7):676-82. (PMID: 22743772)
Bioinformatics. 2021 Jun 16;37(10):1485-1487. (PMID: 32997742)
J Clin Invest. 2018 May 1;128(5):2064-2075. (PMID: 29664014)
Immunity. 2016 Sep 20;45(3):513-526. (PMID: 27523270)
Cell. 2009 Jun 12;137(6):1100-11. (PMID: 19524512)
J Med Chem. 2017 Feb 23;60(4):1247-1261. (PMID: 28151659)
Nature. 2011 Mar 17;471(7338):368-72. (PMID: 21368762)
PLoS Biol. 2018 Aug 29;16(8):e2005756. (PMID: 30157175)
STAR Protoc. 2020 Dec 30;2(1):100251. (PMID: 33458710)
Methods Mol Biol. 2018;1857:125-134. (PMID: 30136236)
Cell. 2007 Nov 16;131(4):682-93. (PMID: 18022363)
Nature. 2016 Dec 1;540(7631):129-133. (PMID: 27819682)
Immunity. 1998 Mar;8(3):297-303. (PMID: 9529147)
BMJ Open Gastroenterol. 2021 Aug;8(1):. (PMID: 34389633)
Immunity. 2020 Sep 15;53(3):533-547.e7. (PMID: 32735843)
J Exp Med. 2020 Jul 6;217(7):. (PMID: 32315377)
Nat Commun. 2018 Jun 21;9(1):2422. (PMID: 29930286)
Genome Biol. 2010;11(3):R25. (PMID: 20196867)
Cell Death Dis. 2022 Apr 1;13(4):291. (PMID: 35365636)
Curr Protoc Cytom. 2001 May;Chapter 8:Unit 8.9. (PMID: 18770747)
Nat Biotechnol. 2018 Jun;36(5):411-420. (PMID: 29608179)
Nat Microbiol. 2017 Jan 13;2:16258. (PMID: 28085133)
Nat Commun. 2020 Jun 19;11(1):3151. (PMID: 32561730)
J Clin Invest. 2020 Apr 1;130(4):2111-2128. (PMID: 31961824)
Cell Death Differ. 2004 Jul;11(7):724-36. (PMID: 15017386)
JCI Insight. 2019 Aug 8;4(15):. (PMID: 31391333)
Genes Dev. 2003 Apr 1;17(7):883-95. (PMID: 12654726)
Methods Mol Biol. 2018;1857:153-160. (PMID: 30136239)
Nucleic Acids Res. 2019 May 7;47(8):e47. (PMID: 30783653)
Biochem Soc Trans. 2022 Dec 16;50(6):1583-1594. (PMID: 36421920)
Cell Death Differ. 2017 Mar;24(3):481-491. (PMID: 28106882)
Elife. 2017 Aug 15;6:. (PMID: 28807105)
Nature. 2020 Feb;578(7796):527-539. (PMID: 32103191)
Immunity. 2020 Jun 16;52(6):978-993.e6. (PMID: 32362323)
Semin Cell Dev Biol. 2018 Oct;82:79-85. (PMID: 29329946)
Genome Biol. 2014 Feb 03;15(2):R29. (PMID: 24485249)
Nat Methods. 2021 Jan;18(1):100-106. (PMID: 33318659)
Cell Death Differ. 2021 Mar;28(3):915-931. (PMID: 32994544)
EMBO Mol Med. 2022 Jun 8;14(6):e14121. (PMID: 35491615)
Mol Cell Biol. 2004 Feb;24(4):1464-9. (PMID: 14749364)
Nat Rev Dis Primers. 2020 Sep 10;6(1):74. (PMID: 32913180)
Trends Cell Biol. 2023 Feb;33(2):162-174. (PMID: 35750616)
Cell Death Differ. 2020 May;27(5):1728-1739. (PMID: 31745214)
Nat Methods. 2020 Jan;17(1):5-6. (PMID: 31740823)
Immunity. 2021 Feb 9;54(2):247-258.e7. (PMID: 33444549)
Cell Death Differ. 2017 Jan;24(1):26-37. (PMID: 27518435)
Nat Rev Dis Primers. 2020 Apr 2;6(1):22. (PMID: 32242028)
Cell. 2012 Jan 20;148(1-2):213-27. (PMID: 22265413)
Cell Rep. 2019 Sep 24;28(13):3309-3319.e5. (PMID: 31553902)
Cell. 2009 Jun 12;137(6):1112-23. (PMID: 19524513)
Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):12024-9. (PMID: 23818611)
FASEB J. 2020 Oct;34(10):13494-13506. (PMID: 32779265)
Cell Death Differ. 2016 Sep 1;23(9):1565-76. (PMID: 27177019)
Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20054-9. (PMID: 22123964)
Cell Res. 2022 Apr;32(4):407-410. (PMID: 34728815)
Cell. 2019 Jun 13;177(7):1888-1902.e21. (PMID: 31178118)
Immunity. 2023 Jul 11;56(7):1578-1595.e8. (PMID: 37329888)
PLoS One. 2016 May 27;11(5):e0156334. (PMID: 27232601)
Nat Chem Biol. 2005 Jul;1(2):112-9. (PMID: 16408008)
Nat Commun. 2021 Apr 13;12(1):2211. (PMID: 33850121)
Immunity. 2016 Mar 15;44(3):553-567. (PMID: 26982364)
Nature. 2020 Apr;580(7803):386-390. (PMID: 32296174)
Cell. 2020 Mar 19;180(6):1115-1129.e13. (PMID: 32200799)
STAR Protoc. 2022 Sep 16;3(3):101517. (PMID: 35779260)
Nature. 2018 Oct;562(7727):367-372. (PMID: 30283141)
Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15072-7. (PMID: 25288762)
Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5322-7. (PMID: 22421439)
Am J Respir Crit Care Med. 2021 Sep 15;204(6):667-681. (PMID: 34133911)
Nature. 2017 Nov 16;551(7680):333-339. (PMID: 29144463)
EMBO Rep. 2023 Sep 6;24(9):e56454. (PMID: 37493498)
Nat Commun. 2020 Jun 19;11(1):3150. (PMID: 32561755)
Gastroenterology. 2022 Dec;163(6):1643-1657.e14. (PMID: 36037995)
PLoS Biol. 2020 Jul 14;18(7):e3000410. (PMID: 32663219)
Cell Death Differ. 2022 Dec;29(12):2519-2530. (PMID: 35831623)
Cell Death Differ. 2016 Jan;23(1):76-88. (PMID: 26024392)
Cell Death Differ. 2014 Oct;21(10):1600-12. (PMID: 24902899)
Cell Death Differ. 2023 Jan;30(1):27-36. (PMID: 35871233)
Science. 2014 Mar 21;343(6177):1357-60. (PMID: 24557836)
Mol Biol Evol. 2021 Dec 9;38(12):5405-5422. (PMID: 34436583)
Am J Gastroenterol. 2014 Feb;109(2):279-87. (PMID: 24322838)
Cell Host Microbe. 2014 Mar 12;15(3):382-392. (PMID: 24629344)
Science. 2016 Aug 5;353(6299):603-8. (PMID: 27493188)
Cell Res. 2014 Jan;24(1):105-21. (PMID: 24366341)
Nat Chem Biol. 2008 May;4(5):313-21. (PMID: 18408713)
JCI Insight. 2023 Mar 22;8(6):. (PMID: 36795486)
J Biol Chem. 2006 May 19;281(20):13964-71. (PMID: 16547002)
Cell. 2022 May 12;185(10):1777-1792.e21. (PMID: 35512705)
Nat Biotechnol. 2015 May;33(5):495-502. (PMID: 25867923)
معلومات مُعتمدة: 1172929 DHAC | National Health and Medical Research Council (NHMRC); 2008652 DHAC | National Health and Medical Research Council (NHMRC); 2002965 DHAC | National Health and Medical Research Council (NHMRC); 9000719 DHAC | National Health and Medical Research Council (NHMRC)
فهرسة مساهمة: Keywords: IBD; Immunohistochemistry; MLKL; Necroptosis; RIPK3
المشرفين على المادة: EC 2.7.11.1 (Receptor-Interacting Protein Serine-Threonine Kinases)
EC 2.7.- (Protein Kinases)
EC 3.4.22.- (Caspase 8)
EC 2.7.11.1 (Ripk3 protein, mouse)
EC 2.7.- (MLKL protein, human)
EC 2.7.11.1 (RIPK3 protein, human)
EC 2.7.- (MLKL protein, mouse)
EC 2.7.11.1 (RIPK1 protein, human)
EC 2.7.11.1 (Ripk1 protein, mouse)
تواريخ الأحداث: Date Created: 20240515 Date Completed: 20240715 Latest Revision: 20240718
رمز التحديث: 20240718
مُعرف محوري في PubMed: PMC11250867
DOI: 10.1038/s44321-024-00074-6
PMID: 38750308
قاعدة البيانات: MEDLINE
الوصف
تدمد:1757-4684
DOI:10.1038/s44321-024-00074-6