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Phylogenomics reveals the evolutionary origins of lichenization in chlorophyte algae.

التفاصيل البيبلوغرافية
العنوان: Phylogenomics reveals the evolutionary origins of lichenization in chlorophyte algae.
المؤلفون: Puginier C; Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP, Toulouse, 31320, Castanet-Tolosan, France., Libourel C; Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP, Toulouse, 31320, Castanet-Tolosan, France., Otte J; Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage 25, 60325, Frankfurt am Main, Germany., Skaloud P; Department of Botany, Faculty of Science, Charles University, Benátská 2, CZ-12800, Praha 2, Czech Republic., Haon M; INRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques (BBF), 13009, Marseille, France.; INRAE, Aix Marseille Université, 3PE Platform, 13009, Marseille, France., Grisel S; INRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques (BBF), 13009, Marseille, France.; INRAE, Aix Marseille Université, 3PE Platform, 13009, Marseille, France., Petersen M; High Performance Computing & Analytics Lab, University of Bonn, Friedrich-Hirzebruch-Allee 8, 53115, Bonn, Germany., Berrin JG; INRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques (BBF), 13009, Marseille, France.; INRAE, Aix Marseille Université, 3PE Platform, 13009, Marseille, France., Delaux PM; Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP, Toulouse, 31320, Castanet-Tolosan, France. pierre-marc.delaux@cnrs.fr., Dal Grande F; Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage 25, 60325, Frankfurt am Main, Germany. francesco.dalgrande@unipd.it.; LOEWE Centre for Translational Biodiversity Genomics (TBG), Senckenberganlage 25, 60325, Frankfurt am Main, Germany. francesco.dalgrande@unipd.it.; Department of Biology, University of Padova, Padua, Italy. francesco.dalgrande@unipd.it., Keller J; Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP, Toulouse, 31320, Castanet-Tolosan, France. jean.keller@cnrs.fr.; Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, 07745, Jena, Germany. jean.keller@cnrs.fr.
المصدر: Nature communications [Nat Commun] 2024 May 24; Vol. 15 (1), pp. 4452. Date of Electronic Publication: 2024 May 24.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
أسماء مطبوعة: Original Publication: [London] : Nature Pub. Group
مواضيع طبية MeSH: Lichens*/genetics , Lichens*/microbiology , Phylogeny* , Symbiosis*/genetics , Chlorophyta*/genetics, Gene Transfer, Horizontal ; Evolution, Molecular ; Biological Evolution ; Transcriptome ; Glycoside Hydrolases/genetics ; Glycoside Hydrolases/metabolism ; Genomics
مستخلص: Mutualistic symbioses have contributed to major transitions in the evolution of life. Here, we investigate the evolutionary history and the molecular innovations at the origin of lichens, which are a symbiosis established between fungi and green algae or cyanobacteria. We de novo sequence the genomes or transcriptomes of 12 lichen algal symbiont (LAS) and closely related non-symbiotic algae (NSA) to improve the genomic coverage of Chlorophyte algae. We then perform ancestral state reconstruction and comparative phylogenomics. We identify at least three independent gains of the ability to engage in the lichen symbiosis, one in Trebouxiophyceae and two in Ulvophyceae, confirming the convergent evolution of the lichen symbioses. A carbohydrate-active enzyme from the glycoside hydrolase 8 (GH8) family was identified as a top candidate for the molecular-mechanism underlying lichen symbiosis in Trebouxiophyceae. This GH8 was acquired in lichenizing Trebouxiophyceae by horizontal gene transfer, concomitantly with the ability to associate with lichens fungal symbionts (LFS) and is able to degrade polysaccharides found in the cell wall of LFS. These findings indicate that a combination of gene family expansion and horizontal gene transfer provided the basis for lichenization to evolve in chlorophyte algae.
(© 2024. The Author(s).)
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المشرفين على المادة: EC 3.2.1.- (Glycoside Hydrolases)
تواريخ الأحداث: Date Created: 20240524 Date Completed: 20240524 Latest Revision: 20240527
رمز التحديث: 20240527
مُعرف محوري في PubMed: PMC11126685
DOI: 10.1038/s41467-024-48787-z
PMID: 38789482
قاعدة البيانات: MEDLINE
الوصف
تدمد:2041-1723
DOI:10.1038/s41467-024-48787-z