دورية أكاديمية
Phylogenomic Characterization of Ranavirus Isolated from Wild Smallmouth Bass ( Micropterus dolomieu ).
| العنوان: | Phylogenomic Characterization of Ranavirus Isolated from Wild Smallmouth Bass ( Micropterus dolomieu ). |
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| المؤلفون: | Quail H; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA.; Emerging Pathogens Institute, University of Florida, Gainesville, FL 32610, USA., Viadanna PHO; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA.; Emerging Pathogens Institute, University of Florida, Gainesville, FL 32610, USA., Vann JA; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA.; Emerging Pathogens Institute, University of Florida, Gainesville, FL 32610, USA., Hsu HM; Wisconsin Veterinary Diagnostic Laboratory, University of Wisconsin-Madison, Madison, WI 53706, USA., Pohly A; Wisconsin Veterinary Diagnostic Laboratory, University of Wisconsin-Madison, Madison, WI 53706, USA., Smith W; Wisconsin Department of Natural Resources, Bureau of Fisheries Management, 2801 Progress Road, Madison, WI 53716, USA., Hansen S; Wisconsin Department of Natural Resources, Bureau of Fisheries Management, 2801 Progress Road, Madison, WI 53716, USA., Nietlisbach N; Wisconsin Department of Natural Resources, Bureau of Fisheries Management, 2801 Progress Road, Madison, WI 53716, USA., Godard D; Wisconsin Department of Natural Resources, Bureau of Fisheries Management, 2801 Progress Road, Madison, WI 53716, USA., Waltzek TB; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA.; Emerging Pathogens Institute, University of Florida, Gainesville, FL 32610, USA., Subramaniam K; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA.; Emerging Pathogens Institute, University of Florida, Gainesville, FL 32610, USA. |
| المصدر: | Viruses [Viruses] 2024 Apr 30; Vol. 16 (5). Date of Electronic Publication: 2024 Apr 30. |
| نوع المنشور: | Journal Article |
| اللغة: | English |
| بيانات الدورية: | Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915 (Electronic) Linking ISSN: 19994915 NLM ISO Abbreviation: Viruses Subsets: MEDLINE |
| أسماء مطبوعة: | Original Publication: Basel, Switzerland : MDPI |
| مواضيع طبية MeSH: | Ranavirus*/genetics , Ranavirus*/isolation & purification , Ranavirus*/classification , Bass*/virology , Phylogeny* , DNA Virus Infections*/virology , DNA Virus Infections*/veterinary , Fish Diseases*/virology , Genome, Viral*, Animals ; Capsid Proteins/genetics ; Genotype ; Lakes/virology |
| مستخلص: | In September 2021, 14 smallmouth bass (SMB; Micropterus dolomieu) with skin lesions were collected from Green Bay waters of Lake Michigan and submitted for diagnostic evaluation. All the skin samples tested positive for largemouth bass virus (LMBV) by conventional PCR. The complete genome of the LMBV (99,328 bp) isolated from a homogenized skin sample was determined using an Illumina MiSeq sequencer. A maximum likelihood (ML) phylogenetic analysis based on the 21 core iridovirus genes supported the LMBV isolated from SMB (LMBV-WVL21117) as a member of the species Santee-Cooper ranavirus . Pairwise nucleotide comparison of the major capsid protein (MCP) gene showed that LMBV-WVL21117 is identical to other LMBV reported from the United States and nearly identical to doctor fish virus and guppy virus 6 (99.2%) from Southeast Asia, as well as LMBV isolates from China and Thailand (99.1%). In addition, ML phylogenetic analysis based on the MCP gene suggests three genotypes of LMBV separated by region: genotype one from the United States, genotype two from Southeast Asia, and genotype three from China and Thailand. Additional research is needed to understand the prevalence and genetic diversity of LMBV strains circulating in wild and managed fish populations from different regions. |
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| فهرسة مساهمة: | Keywords: iridovirus; largemouth bass virus; ranavirus; smallmouth bass |
| المشرفين على المادة: | 0 (Capsid Proteins) |
| تواريخ الأحداث: | Date Created: 20240525 Date Completed: 20240525 Latest Revision: 20240528 |
| رمز التحديث: | 20240529 |
| مُعرف محوري في PubMed: | PMC11126109 |
| DOI: | 10.3390/v16050715 |
| PMID: | 38793597 |
| قاعدة البيانات: | MEDLINE |
Full Text Finder | تدمد: | 1999-4915 |
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| DOI: | 10.3390/v16050715 |