Clinging on the brink: Whole genomes reveal human-induced population declines and severe inbreeding in the Critically Endangered Emirati Leaf-toed Gecko (Asaccus caudivolvulus).

التفاصيل البيبلوغرافية
العنوان:	Clinging on the brink: Whole genomes reveal human-induced population declines and severe inbreeding in the Critically Endangered Emirati Leaf-toed Gecko (Asaccus caudivolvulus).
المؤلفون:	Burriel-Carranza B; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain.; Museu de Ciències Naturals de Barcelona, Barcelona, Spain., Mochales-Riaño G; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Talavera A; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Els J; Breeding Centre for Endangered Arabian Wildlife, Environment and Protected Areas Authority, Sharjah, United Arab Emirates., Estarellas M; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Al Saadi S; Environment Authority, Muscat, Oman., Urriago Suarez JD; Fujairah Research Centre, Fujairah, United Arab Emirates.; Foresea, Dubai, United Arab Emirates., Olsson PO; Fujairah Genetics Center, Fujairah, United Arab Emirates., Matschiner M; Natural History Museum, University of Oslo, Oslo, Norway., Carranza S; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain.
المصدر:	Molecular ecology [Mol Ecol] 2024 Aug; Vol. 33 (15), pp. e17451. Date of Electronic Publication: 2024 Jul 06.
نوع المنشور:	Journal Article
اللغة:	English
بيانات الدورية:	Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-294X (Electronic) Linking ISSN: 09621083 NLM ISO Abbreviation: Mol Ecol Subsets: MEDLINE
أسماء مطبوعة:	Original Publication: Oxford, UK : Blackwell Scientific Publications, c1992-
مواضيع طبية MeSH:	Endangered Species* , Lizards/genetics , Inbreeding , Ecosystem* , Genetics, Population*, Animals ; United Arab Emirates ; Genetic Variation ; Population Dynamics ; Genome/genetics ; Humans ; Conservation of Natural Resources
مستخلص:	Human-mediated habitat destruction has had a profound impact on increased species extinction rates and population declines worldwide. The coastal development in the United Arab Emirates (UAE) over the last two decades, serves as an example of how habitat transformation can alter the landscape of a country in just a few years. Here, we study the genomic implications of habitat transformation in the Critically Endangered Emirati Leaf-toed Gecko (Asaccus caudivolvulus), the only endemic vertebrate of the UAE. We generate a high-quality reference genome for this gecko, representing the first reference genome for the family Phyllodactylidae, and produce whole-genome resequencing data for 23 specimens from 10 different species of leaf-toed geckos. Our results show that A. caudivolvulus has consistently lower genetic diversity than any other Arabian species of Asaccus, suggesting a history of ancient population declines. However, high levels of recent inbreeding are recorded among populations in heavily developed areas, with a more than 50% increase in long runs of homozygosity within a 9-year period. Moreover, results suggest that this species does not effectively purge deleterious mutations, hence making it more vulnerable to future stochastic threats. Overall, results show that A. caudivolvulus is in urgent need of protection, and habitat preservation must be warranted to ensure the species' survival. (© 2024 John Wiley & Sons Ltd.)
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معلومات مُعتمدة:	212527924 Mohamed Bin Zayed Species Conservation Fund; PID2021-128901NB-I00 MCIN/AEI/10.13039/501100011033 and by ERDF, a way of making Europe; 22412027 Field Study for the Conservation of Reptiles in Oman, Ministry of Environment and Climate Affairs, Oman; 2021 SGR 00751 Departament de Recerca i Universitats de la Generalitat de Catalunya; FPU18/04742 Ministerio de Ciencia, Innovación y Universidades; PRE2019-088729 Ministerio de Ciencia, Innovación y Universidades; PRE2022-101473 Ministerio de Ciencia, Innovación y Universidades; LCF/BQ/DR20/11790007 "la Caixa" doctoral fellowship programme
فهرسة مساهمة:	Keywords: conservation genomics; genomics; population genetics – empirical; reptiles
تواريخ الأحداث:	Date Created: 20240706 Date Completed: 20240722 Latest Revision: 20240722
رمز التحديث:	20240722
DOI:	10.1111/mec.17451
PMID:	38970417
قاعدة البيانات:	MEDLINE

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تدمد:	1365-294X
DOI:	10.1111/mec.17451