دورية أكاديمية

Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein.

التفاصيل البيبلوغرافية
العنوان: Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein.
المؤلفون: Gladue DP; Plum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA., Gomez-Lucas L; Instituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain., Largo E; Department of Immunology, Microbiology and Parasitology, Faculty of Medicine and Nursing, University of the Basque Country (UPV/EHU), Leioa, Spain., Ramirez-Medina E; Plum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA., Torralba J; Instituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain., Queralt-Martín M; Laboratory of Molecular Biophysics. Department of Physics, University Jaume I, Castello, Castellón, Spain., Alcaraz A; Laboratory of Molecular Biophysics. Department of Physics, University Jaume I, Castello, Castellón, Spain., Velazquez-Salinas L; Plum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA., Nieva JL; Instituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain., Borca MV; Plum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA.
المصدر: Journal of virology [J Virol] 2024 Aug 20; Vol. 98 (8), pp. e0023124. Date of Electronic Publication: 2024 Jul 09.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: American Society For Microbiology Country of Publication: United States NLM ID: 0113724 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5514 (Electronic) Linking ISSN: 0022538X NLM ISO Abbreviation: J Virol Subsets: MEDLINE
أسماء مطبوعة: Publication: Washington Dc : American Society For Microbiology
Original Publication: Baltimore, American Society for Microbiology.
مواضيع طبية MeSH: African Swine Fever Virus*/genetics , African Swine Fever Virus*/metabolism, Animals ; Swine ; Endoplasmic Reticulum/metabolism ; Endoplasmic Reticulum/virology ; Protein Domains ; Viroporin Proteins/metabolism ; Viroporin Proteins/genetics ; African Swine Fever/virology ; African Swine Fever/metabolism ; Viral Proteins/metabolism ; Viral Proteins/genetics ; Viral Proteins/chemistry ; Amino Acid Sequence
مستخلص: African swine fever virus (ASFV) is the causative agent of a contagious disease affecting wild and domestic swine. The function of B169L protein, as a potential integral structural membrane protein, remains to be experimentally characterized. Using state-of-the-art bioinformatics tools, we confirm here earlier predictions indicating the presence of an integral membrane helical hairpin, and further suggest anchoring of this protein to the ER membrane, with both terminal ends facing the lumen of the organelle. Our evolutionary analysis confirmed the importance of purifying selection in the preservation of the identified domains during the evolution of B169L in nature. Also, we address the possible function of this hairpin transmembrane domain (HTMD) as a class IIA viroporin. Expression of GFP fusion proteins in the absence of a signal peptide supported B169L insertion into the ER as a Type III membrane protein and the formation of oligomers therein. Overlapping peptides that spanned the B169L HTMD were reconstituted into ER-like membranes and the adopted structures analyzed by infrared spectroscopy. Consistent with the predictions, B169L transmembrane sequences adopted α-helical conformations in lipid bilayers. Moreover, single vesicle permeability assays demonstrated the assembly of lytic pores in ER-like membranes by B169L transmembrane helices, a capacity confirmed by ion-channel activity measurements in planar bilayers. Emphasizing the relevance of these observations, pore-forming activities were not observed in the case of transmembrane helices derived from EP84R, another ASFV protein predicted to anchor to membranes through a α-helical HTMD. Overall, our results support predictions of viroporin-like function for the B169L HTMD.IMPORTANCEAfrican swine fever (ASF), a devastating disease affecting domestic swine, is widely spread in Eurasia, producing significant economic problems in the pork industry. Approaches to prevent/cure the disease are mainly restricted to the limited information concerning the role of most of the genes encoded by the large (160-170 kba) virus genome. In this report, we present the experimental data on the functional characterization of the African swine fever virus (ASFV) gene B169L. Data presented here indicates that the B169L gene encodes for an essential membrane-associated protein with a viroporin function.
Competing Interests: The authors declare no conflict of interest.
References: Mol Biol Evol. 2018 Jun 1;35(6):1547-1549. (PMID: 29722887)
J Gen Virol. 2008 Feb;89(Pt 2):397-408. (PMID: 18198370)
Biochim Biophys Acta Biomembr. 2018 May;1860(5):1015-1021. (PMID: 29317201)
J Gen Virol. 2015 Aug;96(8):2000-2027. (PMID: 26023149)
Nat Methods. 2022 Jan;19(1):11-12. (PMID: 35017726)
Nucleic Acids Res. 2022 Jul 5;50(W1):W228-W234. (PMID: 35489069)
Commun Biol. 2022 Nov 18;5(1):1265. (PMID: 36400835)
J Virol. 2000 Feb;74(3):1275-85. (PMID: 10627538)
Mol Biol Evol. 1992 Jul;9(4):678-87. (PMID: 1630306)
Protein Sci. 2003 Mar;12(3):520-31. (PMID: 12592022)
Sci Rep. 2017 Apr 24;7:46747. (PMID: 28436458)
Annu Rev Microbiol. 2014;68:21-43. (PMID: 24742054)
J Virol. 2020 Mar 17;94(7):. (PMID: 31969432)
J Virol. 2018 Nov 12;92(23):. (PMID: 30185597)
Nat Rev Mol Cell Biol. 2022 Feb;23(2):107-124. (PMID: 34556847)
Traffic. 2011 Jan;12(1):28-41. (PMID: 20955502)
Sci Rep. 2021 Jan 14;11(1):1278. (PMID: 33446748)
J Virol. 2021 Nov 9;95(23):e0119921. (PMID: 34495696)
Bioelectrochemistry. 2021 Feb;137:107641. (PMID: 32889489)
Viruses. 2022 Jun 28;14(7):. (PMID: 35891389)
Nat Rev Microbiol. 2012 Jul 02;10(8):563-74. (PMID: 22751485)
J Virol. 2022 Mar 9;96(5):e0193921. (PMID: 35019713)
Viruses. 2022 May 22;14(5):. (PMID: 35632853)
Virology. 1995 Apr 1;208(1):249-78. (PMID: 11831707)
Bioinform Adv. 2021 Nov 19;1(1):vbab035. (PMID: 36700108)
Mol Biol Evol. 2005 May;22(5):1208-22. (PMID: 15703242)
PLoS Pathog. 2023 Jan 30;19(1):e1011136. (PMID: 36716344)
J Virol. 2023 Jun 29;97(6):e0035023. (PMID: 37212688)
Viruses. 2021 Apr 27;13(5):. (PMID: 33925435)
J Virol. 2022 Jan 12;96(1):e0141921. (PMID: 34668772)
Transbound Emerg Dis. 2021 Nov;68(6):3018-3019. (PMID: 34609795)
Biochemistry. 2004 Mar 30;43(12):3582-9. (PMID: 15035628)
J Virol. 2020 Apr 16;94(9):. (PMID: 32075923)
Curr Top Microbiol Immunol. 2009;328:43-87. (PMID: 19216435)
Methods Mol Biol. 2019;1910:427-468. (PMID: 31278673)
J Virol. 2022 Jul 27;96(14):e0054522. (PMID: 35862691)
Bioinformatics. 2006 Dec 15;22(24):3096-8. (PMID: 17110367)
Mol Biol Evol. 2013 May;30(5):1196-205. (PMID: 23420840)
ACS Infect Dis. 2020 Aug 14;6(8):2155-2168. (PMID: 32584020)
Mol Biol Evol. 2018 Mar 1;35(3):773-777. (PMID: 29301006)
PLoS Genet. 2012;8(7):e1002764. (PMID: 22807683)
Viruses. 2022 Apr 23;14(5):. (PMID: 35632620)
BMC Bioinformatics. 2004 Aug 19;5:113. (PMID: 15318951)
Viruses. 2022 Aug 21;14(8):. (PMID: 36016456)
J Virol. 2016 Dec 16;91(1):. (PMID: 27795430)
Adv Protein Chem Struct Biol. 2016;104:307-355. (PMID: 27038378)
Microbiol Resour Announc. 2022 Dec 15;11(12):e0088122. (PMID: 36409113)
J Virol. 2018 Nov 12;92(23):. (PMID: 30232178)
Front Microbiol. 2020 Oct 23;11:550674. (PMID: 33193132)
J Mol Biol. 1990 Oct 5;215(3):403-10. (PMID: 2231712)
J Biol Chem. 2021 Nov;297(5):101190. (PMID: 34517008)
معلومات مُعتمدة: IT1449-22 Basque Government
فهرسة مساهمة: Keywords: ASF; ASFV; African swine fever; African swine fever virus; B169L; viroporin
المشرفين على المادة: 0 (Viroporin Proteins)
0 (Viral Proteins)
تواريخ الأحداث: Date Created: 20240709 Date Completed: 20240820 Latest Revision: 20240822
رمز التحديث: 20240822
مُعرف محوري في PubMed: PMC11334534
DOI: 10.1128/jvi.00231-24
PMID: 38980063
قاعدة البيانات: MEDLINE
الوصف
تدمد:1098-5514
DOI:10.1128/jvi.00231-24