دورية أكاديمية
أعرض في EDS

Fine-Tuning of Arabidopsis thaliana Response to Endophytic Colonization by Gluconacetobacter diazotrophicus PAL5 Revealed by Transcriptomic Analysis.

التفاصيل البيبلوغرافية
العنوان: Fine-Tuning of Arabidopsis thaliana Response to Endophytic Colonization by Gluconacetobacter diazotrophicus PAL5 Revealed by Transcriptomic Analysis.
المؤلفون: Soares FS; Laboratório de Biotecnologia (Unidade de Biologia Integrativa), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil., Rangel de Souza ALS; Laboratório de Biotecnologia (Unidade de Biologia Integrativa), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil., de Souza SA; Laboratório de Biotecnologia (Unidade de Biologia Integrativa), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil., de Souza Vespoli L; Laboratório de Biotecnologia (Unidade de Biologia Integrativa), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil., Pinto VB; Laboratório de Biologia Celular e Tecidual, UENF, Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil., Matiello L; Instituto de Biologia, Departamento de Genética, Evolução, Microbiologia e Imunologia, Universidade Estadual de Campinas (UNICAMP), Campinas, São Paulo 13083-970, Brazil., da Silva FR; Instituto de Biologia, Departamento de Genética, Evolução, Microbiologia e Imunologia, Universidade Estadual de Campinas (UNICAMP), Campinas, São Paulo 13083-970, Brazil.; Embrapa Agricultura Digital, Campinas, São Paulo 13083-886, Brazil., Menossi M; Instituto de Biologia, Departamento de Genética, Evolução, Microbiologia e Imunologia, Universidade Estadual de Campinas (UNICAMP), Campinas, São Paulo 13083-970, Brazil., de Souza Filho GA; Laboratório de Biotecnologia (Unidade de Biologia Integrativa), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil.
المصدر: Plants (Basel, Switzerland) [Plants (Basel)] 2024 Jun 21; Vol. 13 (13). Date of Electronic Publication: 2024 Jun 21.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101596181 Publication Model: Electronic Cited Medium: Print ISSN: 2223-7747 (Print) Linking ISSN: 22237747 NLM ISO Abbreviation: Plants (Basel) Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI AG, [2012]-
مستخلص: Gluconacetobacter diazotrophicus is a diazotrophic endophytic bacterium that promotes the growth and development of several plant species. However, the molecular mechanisms activated during plant response to this bacterium remain unclear. Here, we used the RNA-seq approach to understand better the effect of G. diazotrophicus PAL5 on the transcriptome of shoot and root tissues of Arabidopsis thaliana . G. diazotrophicus colonized A. thaliana roots and promoted growth, increasing leaf area and biomass. The transcriptomic analysis revealed several differentially expressed genes (DEGs) between inoculated and non-inoculated plants in the shoot and root tissues. A higher number of DEGs were up-regulated in roots compared to shoots. Genes up-regulated in both shoot and root tissues were associated with nitrogen metabolism, production of glucosinolates and flavonoids, receptor kinases, and transcription factors. In contrast, the main groups of down-regulated genes were associated with pathogenesis-related proteins and heat-shock proteins in both shoot and root tissues. Genes encoding enzymes involved in cell wall biogenesis and modification were down-regulated in shoots and up-regulated in roots. In contrast, genes associated with ROS detoxification were up-regulated in shoots and down-regulated in roots. These results highlight the fine-tuning of the transcriptional regulation of A. thaliana in response to colonization by G. diazotrophicus PAL5.
References: Biotechnol Lett. 2010 Aug;32(8):1071-6. (PMID: 20361236)
Mol Plant Microbe Interact. 2021 Oct;34(10):1143-1156. (PMID: 34709058)
Int J Mol Sci. 2019 Oct 25;20(21):. (PMID: 31731530)
Plant J. 2004 Mar;37(6):914-39. (PMID: 14996223)
Trends Plant Sci. 2017 Jan;22(1):11-19. (PMID: 27666517)
iScience. 2022 May 14;25(6):104406. (PMID: 35663012)
Int J Mol Sci. 2022 Sep 25;23(19):. (PMID: 36232602)
Front Plant Sci. 2019 Dec 23;10:1618. (PMID: 31921261)
Plant Cell Rep. 2020 Jan;39(1):3-17. (PMID: 31346716)
Arch Microbiol. 2009 May;191(5):477-83. (PMID: 19340412)
Plant Physiol. 2012 Dec;160(4):2173-88. (PMID: 23073694)
Int J Mol Sci. 2020 Jul 30;21(15):. (PMID: 32751751)
Plant Pathol J. 2015 Dec;31(4):323-33. (PMID: 26676169)
Annu Rev Entomol. 2009;54:57-83. (PMID: 18811249)
J Exp Bot. 2007;58(3):673-86. (PMID: 17210990)
Plant Cell Rep. 2018 Oct;37(10):1359-1366. (PMID: 29663032)
Planta. 2013 Oct;238(4):657-68. (PMID: 23794026)
PLoS One. 2019 May 23;14(5):e0217309. (PMID: 31120967)
J Mol Microbiol Biotechnol. 2009;17(3):124-35. (PMID: 19556746)
Mol Plant Microbe Interact. 2013 Aug;26(8):937-45. (PMID: 23634840)
J Exp Bot. 2018 Aug 14;69(18):4235-4247. (PMID: 29945246)
Plant Physiol Biochem. 2008 Nov;46(11):941-50. (PMID: 18674922)
Microbiol Res. 2016 Feb;183:92-9. (PMID: 26805622)
Planta. 2021 Oct 27;254(6):109. (PMID: 34705112)
Microb Ecol. 2008 Jan;55(1):21-37. (PMID: 17406771)
Nat Protoc. 2012 Mar 01;7(3):562-78. (PMID: 22383036)
Plant Physiol Biochem. 2018 Aug;129:264-272. (PMID: 29906776)
Nucleic Acids Res. 2008 Jun;36(10):3420-35. (PMID: 18445632)
Microbiol Res. 2018 Jul - Aug;212-213:29-37. (PMID: 29853166)
Plant Physiol. 2014 Feb;164(2):1093-107. (PMID: 24367018)
Microb Ecol. 2008 Jan;55(1):130-40. (PMID: 17574542)
AMB Express. 2017 Dec;7(1):153. (PMID: 28724262)
Plants (Basel). 2022 Jul 29;11(15):. (PMID: 35956449)
Front Plant Sci. 2014 May 06;5:178. (PMID: 24834069)
Nat Plants. 2019 Sep;5(9):924-932. (PMID: 31506641)
World J Microbiol Biotechnol. 1994 Jul;10(4):401-5. (PMID: 24421085)
Curr Opin Plant Biol. 2017 Dec;40:106-113. (PMID: 28892802)
Microbiol Res. 2020 Sep;238:126486. (PMID: 32464574)
Proteomics. 2016 Jan;16(1):122-35. (PMID: 26460066)
Am J Bot. 2006 Oct;93(10):1415-25. (PMID: 21642088)
J Exp Bot. 2006;57(3):559-69. (PMID: 16397001)
New Phytol. 2016 Feb;209(3):921-44. (PMID: 26465351)
Mol Plant Microbe Interact. 2011 May;24(5):562-76. (PMID: 21190439)
PeerJ. 2020 Jul 28;8:e9600. (PMID: 33240578)
Microorganisms. 2023 Jan 28;11(2):. (PMID: 36838296)
BMC Genomics. 2009 Sep 23;10:450. (PMID: 19775431)
Plant J. 2003 Oct;36(2):177-88. (PMID: 14535883)
Sci Rep. 2019 Jul 22;9(1):10573. (PMID: 31332206)
J Integr Plant Biol. 2010 Feb;52(2):195-204. (PMID: 20377681)
معلومات مُعتمدة: 001 Coordenação de Aperfeicoamento de Pessoal de Nível Superior; E26/200.491/2023 Fundação de Amparo à Pesquisa do Estado do Rio de Janeiro; 315740/2021-3 Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
فهرسة مساهمة: Keywords: RNA-seq; beneficial endophyte; growth promotion; plant defense
تواريخ الأحداث: Date Created: 20240713 Latest Revision: 20240715
رمز التحديث: 20240715
مُعرف محوري في PubMed: PMC11244368
DOI: 10.3390/plants13131719
PMID: 38999559
قاعدة البيانات: MEDLINE
الوصف
تدمد:2223-7747
DOI:10.3390/plants13131719