دورية أكاديمية
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Refinement of rice blast disease resistance QTLs and gene networks through meta-QTL analysis.

التفاصيل البيبلوغرافية
العنوان: Refinement of rice blast disease resistance QTLs and gene networks through meta-QTL analysis.
المؤلفون: Devanna BN; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India. devanna@icar.gov.in., Sucharita S; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Sunitha NC; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Anilkumar C; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Singh PK; Department of Biotechnology, University Centre for Research and Development, Chandigarh University, Mohali, Punjab, 140413, India., Pramesh D; University of Agricultural Sciences, Raichur, Karnataka, India., Samantaray S; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Behera L; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Katara JL; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Parameswaran C; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Rout P; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Sabarinathan S; ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India., Rajashekara H; ICAR-Directorate of Cashew Research, Puttur, Karnataka, 574202, India., Sharma TR; Division of Crop Science, Indian Council of Agricultural Research, Krishi Bhavan, New Delhi, 110001, India. trsharma1965@gmail.com.
المصدر: Scientific reports [Sci Rep] 2024 Jul 16; Vol. 14 (1), pp. 16458. Date of Electronic Publication: 2024 Jul 16.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Nature Publishing Group, copyright 2011-
مواضيع طبية MeSH: Oryza*/genetics , Disease Resistance*/genetics , Quantitative Trait Loci* , Plant Diseases*/genetics , Plant Diseases*/microbiology , Gene Regulatory Networks*, Chromosomes, Plant/genetics ; Chromosome Mapping ; Genes, Plant
مستخلص: Rice blast disease is the most devastating disease constraining crop productivity. Vertical resistance to blast disease is widely studied despite its instability. Clusters of genes or QTLs conferring blast resistance that offer durable horizontal resistance are important in resistance breeding. In this study, we aimed to refine the reported QTLs and identify stable meta-QTLs (MQTLs) associated with rice blast resistance. A total of 435 QTLs were used to project 71 MQTLs across all the rice chromosomes. As many as 199 putative rice blast resistance genes were identified within 53 MQTL regions. The genes included 48 characterized resistance gene analogs and related proteins, such as NBS-LRR type, LRR receptor-like kinase, NB-ARC domain, pathogenesis-related TF/ERF domain, elicitor-induced defense and proteins involved in defense signaling. MQTL regions with clusters of RGA were also identified. Fifteen highly significant MQTLs included 29 candidate genes and genes characterized for blast resistance, such as Piz, Nbs-Pi9, pi55-1, pi55-2, Pi3/Pi5-1, Pi3/Pi5-2, Pikh, Pi54, Pik/Pikm/Pikp, Pb1 and Pb2. Furthermore, the candidate genes (42) were associated with differential expression (in silico) in compatible and incompatible reactions upon disease infection. Moreover, nearly half of the genes within the MQTL regions were orthologous to those in O. sativa indica, Z. mays and A. thaliana, which confirmed their significance. The peak markers within three significant MQTLs differentiated blast-resistant and susceptible lines and serve as potential surrogates for the selection of blast-resistant lines. These MQTLs are potential candidates for durable and broad-spectrum rice blast resistance and could be utilized in blast resistance breeding.
(© 2024. The Author(s).)
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فهرسة مساهمة: Keywords: Magnaporthe oryzae; Candidate genes; Characterized genes; Meta-QTL; Orthologous genes; Resistance gene analogs; Rice blast
تواريخ الأحداث: Date Created: 20240716 Date Completed: 20240716 Latest Revision: 20240801
رمز التحديث: 20240801
مُعرف محوري في PubMed: PMC11252161
DOI: 10.1038/s41598-024-64142-0
PMID: 39013915
قاعدة البيانات: MEDLINE
الوصف
تدمد:2045-2322
DOI:10.1038/s41598-024-64142-0