دورية أكاديمية

Lacrimispora brassicae sp. nov. isolated from fermented cabbage, and proposal of Clostridium indicum Gundawar et al . 2019 and Clostridium methoxybenzovorans Mechichi et al . 1999 as heterotypic synonyms of Lacrimispora amygdalina (Parshina et al . 2003) Haas and Blanchard 2020 and Lacrimispora indolis (McClung and McCoy 1957) Haas and Blanchard 2020, respectively.

التفاصيل البيبلوغرافية
العنوان: Lacrimispora brassicae sp. nov. isolated from fermented cabbage, and proposal of Clostridium indicum Gundawar et al . 2019 and Clostridium methoxybenzovorans Mechichi et al . 1999 as heterotypic synonyms of Lacrimispora amygdalina (Parshina et al . 2003) Haas and Blanchard 2020 and Lacrimispora indolis (McClung and McCoy 1957) Haas and Blanchard 2020, respectively.
المؤلفون: Kobayashi H; Institute of Livestock and Grassland Science, National Agriculture and Food Research Organization, Nasushiobara, Tochigi 329-2793, Japan., Tanizawa Y; Department of Informatics, National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan., Sakamoto M; Microbe Division/Japan Collection of Microorganisms, RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan., Ohkuma M; Microbe Division/Japan Collection of Microorganisms, RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan., Tohno M; Institute of Livestock and Grassland Science, National Agriculture and Food Research Organization, Nasushiobara, Tochigi 329-2793, Japan.; Research Center of Genetic Resources, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8602, Japan.; Innovative Animal Production System, University of Tsukuba, 305-8571 Tsukuba, Japan.
المصدر: International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2024 Jul; Vol. 74 (7).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Microbiology Society Country of Publication: England NLM ID: 100899600 Publication Model: Print Cited Medium: Internet ISSN: 1466-5034 (Electronic) Linking ISSN: 14665026 NLM ISO Abbreviation: Int J Syst Evol Microbiol Subsets: MEDLINE
أسماء مطبوعة: Publication: 2015- : London : Microbiology Society
Original Publication: Reading, UK : Society for General Microbiology, c2000-
مواضيع طبية MeSH: Phylogeny* , RNA, Ribosomal, 16S*/genetics , Fatty Acids*/analysis , Brassica*/microbiology , Bacterial Typing Techniques* , DNA, Bacterial*/genetics , Fermentation* , Sequence Analysis, DNA* , Nucleic Acid Hybridization*, Base Composition ; Clostridiales/classification ; Clostridiales/isolation & purification ; Clostridiales/genetics ; Indoles/metabolism
مستخلص: A Gram-stain-negative, endospore-forming, rod-shaped, indole-producing bacterial strain, designated YZC6 T , was isolated from fermented cabbage. Strain YZC6 T grew at 10-37  °C, pH 5.5-8.5, and with up to 2  % (w/v) NaCl. The major cellular fatty acids were C 16 : 0 and C 18 : 1 cis 11 dimethyl acetal. Phylogenetic analysis of the 16S rRNA gene revealed that strain YZC6 T belonged to the genus Lacrimispora and was closely related to Lacrimispora aerotolerans DSM 5434 T (98.3  % sequence similarity), Lacrimispora saccharolytica WM1 T (98.1  %), and Lacrimispora algidixylanolytica SPL73 T (98.1  %). The average nucleotide identity based on blast (below 87.8  %) and digital DNA-DNA hybridization (below 36.1 %) values between the novel isolate and its corresponding relatives showed that strain YZC6 T could be readily distinguished from its closely related species. Based on genotypic, phenotypic, and chemotaxonomic data, a novel Lacrimispora species, Lacrimispora brassicae sp. nov., was proposed, with YZC6 T as the type strain (=MAFF 212518 T =JCM 32810 T =DSM 112100 T ). This study also proposed Clostridium indicum Gundawar et al . 2019 as a later heterotypic synonym of Lacrimispora amygdalina (Parshina et al . 2003) Haas and Blanchard 2020 and Clostridium methoxybenzovorans Mechichi et al . 1999 as a later heterotypic synonym of Lacrimispora indolis (McClung and McCpy 1957) Haas and Blanchard 2020.
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فهرسة مساهمة: Keywords: Bacillota; Lacrimispora brassicae sp. nov.; fermented cabbage
المشرفين على المادة: 0 (RNA, Ribosomal, 16S)
0 (Fatty Acids)
0 (DNA, Bacterial)
0 (Indoles)
تواريخ الأحداث: Date Created: 20240717 Date Completed: 20240717 Latest Revision: 20240812
رمز التحديث: 20240813
مُعرف محوري في PubMed: PMC11316579
DOI: 10.1099/ijsem.0.006456
PMID: 39016536
قاعدة البيانات: MEDLINE
الوصف
تدمد:1466-5034
DOI:10.1099/ijsem.0.006456