دورية أكاديمية
Transcriptome datasets and histological profiles of critical larval stages in gilthead seabream.
| العنوان: | Transcriptome datasets and histological profiles of critical larval stages in gilthead seabream. |
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| المؤلفون: | Najafpour B; Centro de Ciências do Mar (CCMAR), Universidade do Algarve, Faro, Portugal., Canário AV; Centro de Ciências do Mar (CCMAR), Universidade do Algarve, Faro, Portugal.; International Research Center for Marine Biosciences (Ministry of Science and Technology), Shanghai Ocean University, Shanghai, China., Power DM; Centro de Ciências do Mar (CCMAR), Universidade do Algarve, Faro, Portugal.; International Research Center for Marine Biosciences (Ministry of Science and Technology), Shanghai Ocean University, Shanghai, China. |
| المصدر: | Data in brief [Data Brief] 2024 Jun 13; Vol. 55, pp. 110571. Date of Electronic Publication: 2024 Jun 13 (Print Publication: 2024). |
| نوع المنشور: | Journal Article |
| اللغة: | English |
| بيانات الدورية: | Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101654995 Publication Model: eCollection Cited Medium: Internet ISSN: 2352-3409 (Electronic) Linking ISSN: 23523409 NLM ISO Abbreviation: Data Brief Subsets: PubMed not MEDLINE |
| أسماء مطبوعة: | Original Publication: [Amsterdam] : Elsevier B.V., [2014]- |
| مستخلص: | The transcriptome of the seabream larvae farmed in different European commercial hatcheries was analysed during critical larval stages. The complementary data herein presented support the findings reported in the associated research article "Insights into core molecular changes associated with metamorphosis in gilthead seabream larvae across diverse hatcheries". Samples were collected from gilthead seabream ( Sparus aurata ) hatcheries in Greece (site Gr), Italy (site It), and France (site Fr). RNA was extracted from larvae with different weights, mainly at the flexion (23 and 25 dph) and mid-metamorphosis stages (43, 50, 52, 56, and 60 dph). RNA-seq libraries were sequenced using Illumina HiSeq xten. The paired-end sequenced raw reads were deposited in the NCBI-SRA database with the accession number PRJNA956882. Differential expression and function of genes were obtained by comparing transcriptome profiles of larvae at different developmental stages. The presented data can be used to improve marine-farmed fish larvae production during critical larval stages. (© 2024 The Authors. Published by Elsevier Inc.) |
| References: | Nucleic Acids Res. 2018 Jul 2;46(W1):W537-W544. (PMID: 29790989) Nucleic Acids Res. 2013 May 1;41(10):e108. (PMID: 23558742) Bioinformatics. 2010 Jan 1;26(1):139-40. (PMID: 19910308) Sci Rep. 2020 May 19;10(1):8251. (PMID: 32427895) J Biomed Sci. 2015 Nov 17;22:105. (PMID: 26572131) |
| فهرسة مساهمة: | Keywords: Aquaculture; Early development; Flexion; Gilthead seabream; Mid-metamorphosis |
| تواريخ الأحداث: | Date Created: 20240718 Latest Revision: 20240719 |
| رمز التحديث: | 20240719 |
| مُعرف محوري في PubMed: | PMC11252595 |
| DOI: | 10.1016/j.dib.2024.110571 |
| PMID: | 39022693 |
| قاعدة البيانات: | MEDLINE |
Full Text Finder | تدمد: | 2352-3409 |
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| DOI: | 10.1016/j.dib.2024.110571 |