دورية أكاديمية

A group 3 medulloblastoma stem cell program is maintained by OTX2-mediated alternative splicing.

التفاصيل البيبلوغرافية
العنوان: A group 3 medulloblastoma stem cell program is maintained by OTX2-mediated alternative splicing.
المؤلفون: Saulnier O; The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, Ontario, Canada.; Developmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada.; Genomics and Development of Childhood Cancers, Institut Curie, PSL University, Paris, France.; INSERM U830, Cancer, Heterogeneity, Instability and Plasticity, Institut Curie, PSL University, Paris, France.; SIREDO Oncology Center, Institut Curie, Paris, France., Zagozewski J; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Liang L; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Hendrikse LD; The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, Ontario, Canada.; Developmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada.; Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada., Layug P; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Gordon V; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Aldinger KA; Center for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA.; Department of Pediatrics, Division of Genetic Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA., Haldipur P; Center for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA., Borlase S; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Coudière-Morrison L; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Cai T; Segal Cancer Center, Lady Davis Institute for Medical Research and Gerald Bronfman Department of Oncology, McGill University, Montreal, Quebec, Canada.; Departments of Biochemistry, Human Genetics and Medicine, McGill University, Montreal, Quebec, Canada., Martell E; Department of Pathology, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada.; Department of Human Anatomy and Cell Science, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Gonzales NM; Texas Children's Hospital, Houston, TX, USA.; Department of Pediatrics, Hematology/Oncology, Baylor College of Medicine, Houston, TX, USA., Palidwor G; Ottawa Bioinformatics Core Facility, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada., Porter CJ; Ottawa Bioinformatics Core Facility, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada., Richard S; Segal Cancer Center, Lady Davis Institute for Medical Research and Gerald Bronfman Department of Oncology, McGill University, Montreal, Quebec, Canada.; Departments of Biochemistry, Human Genetics and Medicine, McGill University, Montreal, Quebec, Canada., Sharif T; Department of Pathology, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada.; Department of Human Anatomy and Cell Science, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Millen KJ; Center for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA.; Department of Pediatrics, Division of Genetic Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA., Doble BW; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada.; Department of Pediatrics and Child Health, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada., Taylor MD; The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, Ontario, Canada. mdt.cns@gmail.com.; Developmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada. mdt.cns@gmail.com.; Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada. mdt.cns@gmail.com.; Texas Children's Hospital, Houston, TX, USA. mdt.cns@gmail.com.; Department of Pediatrics, Hematology/Oncology, Baylor College of Medicine, Houston, TX, USA. mdt.cns@gmail.com.; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario, Canada. mdt.cns@gmail.com.; Department of Surgery, University of Toronto, Toronto, Ontario, Canada. mdt.cns@gmail.com.; Texas Children's Cancer and Hematology Center, Houston, TX, USA. mdt.cns@gmail.com.; Department of Neurosurgery, Baylor College of Medicine, Houston, TX, USA. mdt.cns@gmail.com.; Department of Neurosurgery, Texas Children's Hospital, Houston, TX, USA. mdt.cns@gmail.com.; Dan L Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USA. mdt.cns@gmail.com., Werbowetski-Ogilvie TE; Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada. Tamra.Ogilvie@bcm.edu.; Texas Children's Hospital, Houston, TX, USA. Tamra.Ogilvie@bcm.edu.; Department of Pediatrics, Hematology/Oncology, Baylor College of Medicine, Houston, TX, USA. Tamra.Ogilvie@bcm.edu.; Texas Children's Cancer and Hematology Center, Houston, TX, USA. Tamra.Ogilvie@bcm.edu.; Dan L Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USA. Tamra.Ogilvie@bcm.edu.
المصدر: Nature cell biology [Nat Cell Biol] 2024 Aug; Vol. 26 (8), pp. 1233-1246. Date of Electronic Publication: 2024 Jul 18.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Macmillan Magazines Ltd Country of Publication: England NLM ID: 100890575 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4679 (Electronic) Linking ISSN: 14657392 NLM ISO Abbreviation: Nat Cell Biol Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Macmillan Magazines Ltd., [1999-
مواضيع طبية MeSH: Otx Transcription Factors*/metabolism , Otx Transcription Factors*/genetics , Medulloblastoma*/genetics , Medulloblastoma*/pathology , Medulloblastoma*/metabolism , Alternative Splicing*/genetics , Neoplastic Stem Cells*/metabolism , Neoplastic Stem Cells*/pathology , Cerebellar Neoplasms*/genetics , Cerebellar Neoplasms*/pathology , Cerebellar Neoplasms*/metabolism, Humans ; Animals ; Gene Expression Regulation, Neoplastic ; Cell Line, Tumor ; Mice ; Cell Proliferation
مستخلص: OTX2 is a transcription factor and known driver in medulloblastoma (MB), where it is amplified in a subset of tumours and overexpressed in most cases of group 3 and group 4 MB. Here we demonstrate a noncanonical role for OTX2 in group 3 MB alternative splicing. OTX2 associates with the large assembly of splicing regulators complex through protein-protein interactions and regulates a stem cell splicing program. OTX2 can directly or indirectly bind RNA and this may be partially independent of its DNA regulatory functions. OTX2 controls a pro-tumorigenic splicing program that is mirrored in human cerebellar rhombic lip origins. Among the OTX2-regulated differentially spliced genes, PPHLN1 is expressed in the most primitive rhombic lip stem cells, and targeting PPHLN1 splicing reduces tumour growth and enhances survival in vivo. These findings identify OTX2-mediated alternative splicing as a major determinant of cell fate decisions that drive group 3 MB progression.
(© 2024. The Author(s).)
References: Cancer Cell. 2017 Jun 12;31(6):737-754.e6. (PMID: 28609654)
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W193-200. (PMID: 17478515)
Sci Rep. 2018 Feb 14;8(1):3040. (PMID: 29445097)
PLoS Comput Biol. 2018 Aug 17;14(8):e1006360. (PMID: 30118475)
Proc Natl Acad Sci U S A. 1997 Oct 14;94(21):11456-60. (PMID: 9326631)
Cancer Discov. 2017 Mar;7(3):288-301. (PMID: 28213356)
Nature. 2022 Sep;609(7929):1021-1028. (PMID: 36131014)
Mol Cell. 2014 Oct 23;56(2):298-310. (PMID: 25263594)
PLoS Genet. 2012;8(5):e1002717. (PMID: 22615581)
Cancer Res. 2018 Aug 15;78(16):4745-4759. (PMID: 29930101)
Bioinformatics. 2015 Jan 15;31(2):166-9. (PMID: 25260700)
Nature. 2019 Aug;572(7767):67-73. (PMID: 31043743)
BMC Genomics. 2018 Jun 19;19(1):477. (PMID: 29914354)
Cancer Res. 2011 Mar 15;71(6):2045-55. (PMID: 21248070)
Nature. 2022 Sep;609(7929):1012-1020. (PMID: 36131015)
Nat Commun. 2020 Jul 20;11(1):3627. (PMID: 32686664)
RNA. 2012 May;18(5):1041-9. (PMID: 22456266)
Neuron. 2016 Jan 6;89(1):113-28. (PMID: 26687839)
Acta Neuropathol. 2016 Jun;131(6):821-31. (PMID: 27040285)
FEBS Lett. 2016 Dec;590(24):4453-4460. (PMID: 27859055)
Innovation (Camb). 2021 Jul 01;2(3):100141. (PMID: 34557778)
Nat Rev Cancer. 2018 Nov;18(11):669-680. (PMID: 30228301)
Cell. 2020 Dec 23;183(7):1962-1985.e31. (PMID: 33242424)
Biochim Biophys Acta. 2013 Jun-Jul;1829(6-7):643-53. (PMID: 23337853)
Nucleic Acids Res. 2021 Aug 20;49(14):8370-8383. (PMID: 34244793)
Histochem Cell Biol. 2016 May;145(5):545-59. (PMID: 26724814)
Science. 2002 Nov 1;298(5595):1039-43. (PMID: 12351676)
Genome Biol. 2014;15(12):550. (PMID: 25516281)
Science. 2010 Feb 19;327(5968):996-1000. (PMID: 20133523)
PLoS One. 2010 Nov 15;5(11):e13984. (PMID: 21085593)
Genome Biol. 2019 Dec 23;20(1):296. (PMID: 31870423)
Cell. 2021 Jun 24;184(13):3573-3587.e29. (PMID: 34062119)
Nucleic Acids Res. 2016 Jul 8;44(W1):W333-8. (PMID: 27174931)
Science. 2019 Oct 25;366(6464):454-460. (PMID: 31624095)
BMC Cancer. 2016 Feb 17;16:115. (PMID: 26883117)
Chem Rev. 2018 Apr 25;118(8):4339-4364. (PMID: 29251915)
Dis Model Mech. 2015 Oct 1;8(10):1295-309. (PMID: 26398939)
BMC Bioinformatics. 2021 Sep 10;22(1):433. (PMID: 34507520)
Nature. 2012 Aug 2;488(7409):100-5. (PMID: 22832583)
Nucleic Acids Res. 2016 Jan 4;44(D1):D1018-22. (PMID: 26602693)
Cell. 2016 Apr 21;165(3):606-19. (PMID: 27104978)
Wiley Interdiscip Rev RNA. 2017 Mar;8(2):. (PMID: 27748060)
Nature. 2013 Jul 11;499(7457):172-7. (PMID: 23846655)
Nature. 2019 Oct;574(7780):707-711. (PMID: 31664194)
Sci Adv. 2022 Aug 19;8(33):eabm8466. (PMID: 35984874)
Mol Cell. 2016 Jun 16;62(6):875-889. (PMID: 27211866)
Nucleic Acids Res. 2005 Apr 11;33(7):2078-89. (PMID: 15824060)
J Neurooncol. 2012 Dec;110(3):335-48. (PMID: 23054560)
Cell Logist. 2011 Jan;1(1):37-40. (PMID: 21686103)
Nucleic Acids Res. 2021 May 21;49(9):5038-5056. (PMID: 34009296)
Nat Protoc. 2020 Dec;15(12):3971-3999. (PMID: 33139955)
Int J Mol Sci. 2021 Aug 19;22(16):. (PMID: 34445655)
Nat Commun. 2021 May 24;12(1):3034. (PMID: 34031396)
Mol Cancer Res. 2010 Oct;8(10):1344-57. (PMID: 21047732)
Bioinformatics. 2013 Jan 1;29(1):15-21. (PMID: 23104886)
Nucleic Acids Res. 2021 Jan 8;49(D1):D605-D612. (PMID: 33237311)
PLoS One. 2011;6(10):e26058. (PMID: 22016811)
Cancer Res. 2010 Jan 1;70(1):181-91. (PMID: 20028867)
Acta Neuropathol. 2013 Mar;125(3):385-94. (PMID: 23179372)
Acta Neuropathol. 2012 Apr;123(4):485-499. (PMID: 22358458)
Mol Oncol. 2018 Apr;12(4):495-513. (PMID: 29377567)
Nat Commun. 2020 Mar 5;11(1):1201. (PMID: 32139671)
Nucleic Acids Res. 2020 Jul 2;48(W1):W300-W306. (PMID: 32286627)
Nat Neurosci. 2021 Aug;24(8):1163-1175. (PMID: 34140698)
Genesis. 2015 Nov;53(11):685-94. (PMID: 26426291)
Nat Commun. 2021 Mar 19;12(1):1749. (PMID: 33741928)
FEBS Lett. 1999 Feb 19;445(1):160-4. (PMID: 10069392)
Mol Cell. 2007 Nov 30;28(4):665-76. (PMID: 18042460)
Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):E5593-601. (PMID: 25480548)
Genes (Basel). 2019 Sep 25;10(10):. (PMID: 31557926)
Commun Biol. 2022 Jul 14;5(1):697. (PMID: 35835937)
Int J Cancer. 2012 Jul 15;131(2):E21-32. (PMID: 21964830)
Nature. 2012 Aug 2;488(7409):49-56. (PMID: 22832581)
Cell Rep. 2022 Feb 15;38(7):110357. (PMID: 35172149)
معلومات مُعتمدة: R01 CA159859 United States CA NCI NIH HHS; R01 CA255369 United States CA NCI NIH HHS; R01 NS106155 United States NS NINDS NIH HHS; R37 NS095733 United States NS NINDS NIH HHS
المشرفين على المادة: 0 (Otx Transcription Factors)
0 (OTX2 protein, human)
0 (Otx2 protein, mouse)
تواريخ الأحداث: Date Created: 20240718 Date Completed: 20240813 Latest Revision: 20240816
رمز التحديث: 20240816
مُعرف محوري في PubMed: PMC11321995
DOI: 10.1038/s41556-024-01460-5
PMID: 39025928
قاعدة البيانات: MEDLINE
الوصف
تدمد:1476-4679
DOI:10.1038/s41556-024-01460-5