دورية أكاديمية

The complete chloroplast genome of Polyspora axillaris (Theaceae).

التفاصيل البيبلوغرافية
العنوان: The complete chloroplast genome of Polyspora axillaris (Theaceae).
المؤلفون: Tang HT; School of Tropical Agriculture and Forestry of Hainan University, Haikou, China., Li CF; Sanya Nanfan Research Institute of Hainan University, Sanya, China., Zuo SY; Sanya Nanfan Research Institute of Hainan University, Sanya, China., Liu PF; Sanya Nanfan Research Institute of Hainan University, Sanya, China.
المصدر: Mitochondrial DNA. Part B, Resources [Mitochondrial DNA B Resour] 2024 Jul 26; Vol. 9 (7), pp. 929-933. Date of Electronic Publication: 2024 Jul 26 (Print Publication: 2024).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Taylor & Francis Country of Publication: England NLM ID: 101676334 Publication Model: eCollection Cited Medium: Internet ISSN: 2380-2359 (Electronic) Linking ISSN: 23802359 NLM ISO Abbreviation: Mitochondrial DNA B Resour Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: [Abingdon, Oxon, UK] : Taylor & Francis, [2016]-
مستخلص: Polyspora axillaris (Roxb. ex Ker Gawl.) Sweet 1825, is a shrub or tree that is about 9 meters tall in the Theaceae family, mainly distributed in China and Vietnam, and it is widely used as a green tree species in many regions owing to its rapid growth and good adaptability. It is rich in various beneficial extracts for humans, but there are limited studies on it. In this study, we sequenced and annotated the complete plastome of P. axillaris . The chloroplast genome length of P. axillaris is 156,770 bp, with a total of 132 genes, including 37 tRNA genes, 8 rRNA genes and 87 protein-coding genes. The complete chloroplast genome of P. axillaris contains two Inverted Repeats (IRs) of 26,077 bp, a Large Single-Copy (LSC) region of 86,286 bp and a Small Single-Copy (SSC) region of 18,330 bp. The overall G/C content in the chloroplast is 37.3%. Phylogenetic inference shows that P. axillaris formed a sister relationship with P. hainanensis , along with 10 Theaceae species. The research result of P. axillaris will contribute to the genetic preservation of the species and the phylogenetic study of Polyspora .
Competing Interests: No potential conflict of interest was reported by the author(s).
(© 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.)
References: Syst Biol. 2007 Aug;56(4):564-77. (PMID: 17654362)
Mitochondrial DNA B Resour. 2021 Mar 11;6(3):814-815. (PMID: 33763587)
New Phytol. 2017 Aug;215(3):1235-1248. (PMID: 28695680)
Nat Biotechnol. 2019 Aug;37(8):907-915. (PMID: 31375807)
Mol Ecol Resour. 2020 Jan;20(1):348-355. (PMID: 31599058)
Gigascience. 2021 Feb 16;10(2):. (PMID: 33590861)
Bioinformatics. 2012 Jun 15;28(12):1647-9. (PMID: 22543367)
Nucleic Acids Res. 2019 Jul 2;47(W1):W59-W64. (PMID: 30949694)
Mol Biol Evol. 2013 May;30(5):1188-95. (PMID: 23418397)
Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5. (PMID: 27095192)
Mol Ecol Resour. 2023 Apr;23(3):694-704. (PMID: 36587992)
Mol Biol Evol. 2013 Apr;30(4):772-80. (PMID: 23329690)
Genome Biol. 2020 Sep 10;21(1):241. (PMID: 32912315)
Sci Rep. 2022 Sep 26;12(1):15984. (PMID: 36163343)
Mol Biol Evol. 2015 Jan;32(1):268-74. (PMID: 25371430)
BMC Evol Biol. 2014 Jul 07;14:151. (PMID: 25001059)
Antioxidants (Basel). 2019 May 29;8(6):. (PMID: 31146432)
Molecules. 2017 Sep 06;22(9):. (PMID: 28878178)
Mol Biol Evol. 2021 Jun 25;38(7):3022-3027. (PMID: 33892491)
PLoS One. 2013 Aug 23;8(8):e73053. (PMID: 24009730)
BMC Plant Biol. 2024 Feb 6;24(1):89. (PMID: 38317071)
Syst Biol. 2010 May;59(3):307-21. (PMID: 20525638)
فهرسة مساهمة: Keywords: Genomic structure; Polyspora; Theaceae; plastome
تواريخ الأحداث: Date Created: 20240730 Latest Revision: 20240731
رمز التحديث: 20240731
مُعرف محوري في PubMed: PMC11285278
DOI: 10.1080/23802359.2024.2383672
PMID: 39077058
قاعدة البيانات: MEDLINE
الوصف
تدمد:2380-2359
DOI:10.1080/23802359.2024.2383672