دورية أكاديمية

Distinct regulation of ATM signaling by DNA single-strand breaks and APE1.

التفاصيل البيبلوغرافية
العنوان: Distinct regulation of ATM signaling by DNA single-strand breaks and APE1.
المؤلفون: Zhao H; Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA., Li J; Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA., You Z; Department of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO, 63110, USA., Lindsay HD; Lancaster Medical School, Faculty of Health and Medicine, Lancaster University, Lancaster, LA1 4YQ, UK., Yan S; Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA. shan.yan@charlotte.edu.; School of Data Science, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA. shan.yan@charlotte.edu.; Center for Biomedical Engineering and Science, University of North Carolina at Charlotte, Charlotte, USA. shan.yan@charlotte.edu.
المصدر: Nature communications [Nat Commun] 2024 Aug 07; Vol. 15 (1), pp. 6517. Date of Electronic Publication: 2024 Aug 07.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
أسماء مطبوعة: Original Publication: [London] : Nature Pub. Group
مواضيع طبية MeSH: Ataxia Telangiectasia Mutated Proteins*/metabolism , Ataxia Telangiectasia Mutated Proteins*/genetics , DNA Breaks, Single-Stranded* , Signal Transduction* , DNA-(Apurinic or Apyrimidinic Site) Lyase*/metabolism , DNA-(Apurinic or Apyrimidinic Site) Lyase*/genetics, Animals ; Xenopus Proteins/metabolism ; Xenopus Proteins/genetics ; Humans ; Xenopus laevis ; DNA Repair
مستخلص: In response to DNA double-strand breaks or oxidative stress, ATM-dependent DNA damage response (DDR) is activated to maintain genome integrity. However, it remains elusive whether and how DNA single-strand breaks (SSBs) activate ATM. Here, we provide direct evidence in Xenopus egg extracts that ATM-mediated DDR is activated by a defined SSB structure. Our mechanistic studies reveal that APE1 promotes the SSB-induced ATM DDR through APE1 exonuclease activity and ATM recruitment to SSB sites. APE1 protein can form oligomers to activate the ATM DDR in Xenopus egg extracts in the absence of DNA and can directly stimulate ATM kinase activity in vitro. Our findings reveal distinct mechanisms of the ATM-dependent DDR activation by SSBs in eukaryotic systems and identify APE1 as a direct activator of ATM kinase.
(© 2024. The Author(s).)
References: Front Immunol. 2022 Feb 28;13:793096. (PMID: 35296074)
Proc Natl Acad Sci U S A. 2009 Jan 20;106(3):749-54. (PMID: 19131518)
J Cell Biol. 2005 Dec 5;171(5):765-71. (PMID: 16330708)
Int J Mol Sci. 2022 Apr 12;23(8):. (PMID: 35457081)
Mol Cell Biol. 2005 Jul;25(13):5363-79. (PMID: 15964794)
Oncogene. 1999 Nov 25;18(50):7070-9. (PMID: 10597308)
Nucleic Acids Res. 2010 Jan;38(2):441-54. (PMID: 19892829)
J Biol Chem. 2020 Oct 9;295(41):14222-14235. (PMID: 32817342)
Gastroenterology. 2023 Aug;165(2):357-373. (PMID: 37178737)
J Vis Exp. 2012 Nov 05;(69):e4449. (PMID: 23149695)
Nucleic Acids Res. 2020 Feb 28;48(4):1925-1940. (PMID: 31828326)
DNA Repair (Amst). 2008 Jun 1;7(6):849-57. (PMID: 18375193)
J Biol Chem. 2001 Sep 28;276(39):36194-9. (PMID: 11447225)
Nat Struct Mol Biol. 2015 Nov;22(11):924-31. (PMID: 26458045)
Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):3997-4002. (PMID: 25775545)
Nat Struct Mol Biol. 2006 May;13(5):451-7. (PMID: 16622404)
Cell Death Dis. 2012 Dec 06;3:e441. (PMID: 23222511)
Proc Natl Acad Sci U S A. 2005 Sep 13;102(37):13182-7. (PMID: 16141325)
Curr Biol. 2016 Dec 19;26(24):3257-3268. (PMID: 27818175)
Science. 2007 May 25;316(5828):1160-6. (PMID: 17525332)
Mol Cell. 2017 Jun 15;66(6):801-817. (PMID: 28622525)
Int J Radiat Biol. 1989 Apr;55(4):583-92. (PMID: 2564868)
Carcinogenesis. 2015 Aug;36(8):832-40. (PMID: 26025911)
Mol Cell. 2009 Sep 11;35(5):704-15. (PMID: 19748363)
Nat Chem Biol. 2008 Feb;4(2):119-25. (PMID: 18176557)
Nat Cell Biol. 2016 Nov;18(11):1185-1195. (PMID: 27723720)
Nat Cell Biol. 2009 Nov;11(11):1376-82. (PMID: 19783983)
Cancer Res. 2004 Dec 15;64(24):9152-9. (PMID: 15604286)
Nat Rev Cancer. 2015 Mar;15(3):166-80. (PMID: 25709118)
Nature. 2000 Jan 27;403(6768):451-6. (PMID: 10667800)
Nat Genet. 2000 May;25(1):115-9. (PMID: 10802669)
Science. 2010 Oct 22;330(6003):517-21. (PMID: 20966255)
Curr Biol. 2014 Jul 7;24(13):1467-1475. (PMID: 24954049)
Cell Mol Life Sci. 2014 Oct;71(20):3951-67. (PMID: 24947324)
Cell Signal. 2014 May;26(5):857-67. (PMID: 24440306)
J Biol Chem. 2016 Jun 17;291(25):13124-31. (PMID: 27129245)
Int J Mol Sci. 2022 Feb 01;23(3):. (PMID: 35163621)
Antioxid Redox Signal. 2009 Mar;11(3):601-20. (PMID: 18976116)
Antioxid Redox Signal. 2014 Feb 1;20(4):678-707. (PMID: 23834463)
Nature. 2009 Aug 13;460(7257):914-8. (PMID: 19633651)
Cell Death Differ. 2012 Nov;19(11):1741-9. (PMID: 22705848)
Science. 1998 Sep 11;281(5383):1677-9. (PMID: 9733515)
EMBO J. 2008 Dec 3;27(23):3140-50. (PMID: 18971944)
Nat Commun. 2017 Apr 24;8:15104. (PMID: 28436431)
Science. 2004 Apr 2;304(5667):93-6. (PMID: 15064416)
Cell. 2017 Feb 9;168(4):644-656. (PMID: 28187286)
Nat Cell Biol. 2007 Nov;9(11):1311-8. (PMID: 17952060)
Nature. 2003 Jan 30;421(6922):499-506. (PMID: 12556884)
Nat Struct Mol Biol. 2022 Jul;29(7):639-652. (PMID: 35773409)
Nucleic Acids Res. 2013 Nov;41(20):9325-38. (PMID: 23939618)
Cell. 2006 Mar 10;124(5):943-55. (PMID: 16530042)
Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):10592-7. (PMID: 23754435)
Nat Cell Biol. 2006 Jan;8(1):37-45. (PMID: 16327781)
Nat Rev Mol Cell Biol. 2017 Oct;18(10):622-636. (PMID: 28811666)
Mol Cell. 2013 Apr 11;50(1):116-22. (PMID: 23582259)
Blood Cancer J. 2018 Sep 25;8(10):92. (PMID: 30301882)
Genes Cells. 2004 Mar;9(3):179-91. (PMID: 15005706)
Mol Cell. 2000 Apr;5(4):617-27. (PMID: 10882098)
Adv Cancer Res. 2010;108:73-112. (PMID: 21034966)
Science. 1995 Jun 23;268(5218):1749-53. (PMID: 7792600)
J Cell Biol. 2012 Aug 6;198(3):295-304. (PMID: 22869595)
Nature. 2021 Aug;596(7873):583-589. (PMID: 34265844)
Biochem Biophys Res Commun. 2013 Feb 15;431(3):466-71. (PMID: 23333389)
Int J Mol Sci. 2018 Aug 14;19(8):. (PMID: 30110897)
Front Cell Dev Biol. 2021 Nov 02;9:738502. (PMID: 34796173)
Annu Rev Biochem. 2015;84:711-38. (PMID: 25580527)
Biochem J. 2019 Dec 23;476(24):3791-3804. (PMID: 31808793)
Mol Cell Proteomics. 2014 Dec;13(12):3497-506. (PMID: 25225357)
Nucleic Acids Res. 2022 Oct 14;50(18):10503-10525. (PMID: 36200829)
Sci Signal. 2018 Jan 09;11(512):. (PMID: 29317520)
Trends Cell Biol. 2023 May;33(5):361-364. (PMID: 36933998)
Science. 2005 Apr 22;308(5721):551-4. (PMID: 15790808)
Int J Dev Biol. 2016;60(7-8-9):229-236. (PMID: 27160070)
Methods Mol Biol. 2019;1999:161-172. (PMID: 31127575)
J Exp Med. 2006 Feb 20;203(2):297-303. (PMID: 16461339)
Nucleic Acids Res. 2018 Mar 16;46(5):2479-2494. (PMID: 29361157)
J Cell Sci. 2016 Mar 15;129(6):1285. (PMID: 26979625)
Proc Natl Acad Sci U S A. 1996 Aug 20;93(17):8919-23. (PMID: 8799128)
Bioorg Med Chem Lett. 2004 Dec 20;14(24):6083-7. (PMID: 15546735)
Int J Mol Sci. 2021 Jun 11;22(12):. (PMID: 34208390)
J Cell Biol. 2009 Mar 23;184(6):793-804. (PMID: 19289795)
Nat Cell Biol. 2016 Nov;18(11):1196-1207. (PMID: 27723717)
Oncotarget. 2017 Aug 2;8(35):59720-59728. (PMID: 28938675)
PLoS One. 2021 Sep 16;16(9):e0257473. (PMID: 34529719)
Sci Rep. 2020 Feb 28;10(1):3758. (PMID: 32111912)
Cell Cycle. 2011 Feb 1;10(3):469-80. (PMID: 21263215)
Trends Cell Biol. 2022 Sep;32(9):733-745. (PMID: 35643889)
J Biol Chem. 2001 Jun 15;276(24):21951-9. (PMID: 11290740)
Mol Cell. 1998 Mar;1(4):519-29. (PMID: 9660936)
Cancer Sci. 2012 May;103(5):882-8. (PMID: 22329793)
Nat Commun. 2018 Jan 26;9(1):399. (PMID: 29374164)
FEBS Open Bio. 2016 Feb 26;6(4):276-84. (PMID: 27239441)
Mol Cell. 2010 Oct 22;40(2):179-204. (PMID: 20965415)
Nucleic Acids Res. 2016 Mar 18;44(5):2187-98. (PMID: 26733580)
Nucleic Acids Res. 2022 Sep 9;50(16):9521-9533. (PMID: 36018803)
Antioxidants (Basel). 2022 Sep 15;11(9):. (PMID: 36139891)
Methods Enzymol. 2006;408:529-39. (PMID: 16793391)
Proc Natl Acad Sci U S A. 2017 Jan 10;114(2):304-309. (PMID: 28028224)
Mol Cell. 2016 Mar 17;61(6):850-8. (PMID: 26990988)
DNA Repair (Amst). 2009 Nov 2;8(11):1311-20. (PMID: 19709933)
Proc Natl Acad Sci U S A. 2001 Apr 24;98(9):4978-83. (PMID: 11296256)
J Pharmacol Exp Ther. 2010 Sep 1;334(3):988-98. (PMID: 20504914)
Nat Genet. 2003 Apr;33(4):497-501. (PMID: 12640452)
J Exp Med. 2007 Nov 26;204(12):3017-26. (PMID: 18025127)
EMBO J. 2006 Dec 13;25(24):5775-82. (PMID: 17124492)
Nature. 2000 Apr 6;404(6778):613-7. (PMID: 10766245)
Nucleic Acids Res. 2021 May 21;49(9):5003-5016. (PMID: 33872376)
DNA Repair (Amst). 2004 Aug-Sep;3(8-9):889-900. (PMID: 15279774)
Nat Commun. 2016 Jan 29;7:10399. (PMID: 26822533)
Methods Mol Biol. 2009;521:229-52. (PMID: 19563110)
DNA Repair (Amst). 2020 Dec;96:102973. (PMID: 32987353)
DNA Repair (Amst). 2018 Nov;71:93-100. (PMID: 30170830)
Cell Metab. 2014 Dec 2;20(6):967-77. (PMID: 25456739)
Mol Cell. 2014 Jan 9;53(1):7-18. (PMID: 24316220)
Cell. 2008 Sep 19;134(6):969-80. (PMID: 18805090)
Elife. 2023 May 22;12:. (PMID: 37216274)
Mol Cell Biol. 2007 Dec;27(24):8502-9. (PMID: 17923702)
Proc Natl Acad Sci U S A. 2005 Apr 19;102(16):5739-43. (PMID: 15824325)
Mol Cell. 2014 May 8;54(3):460-71. (PMID: 24726325)
معلومات مُعتمدة: R03 CA270663 United States CA NCI NIH HHS; Seed Grants UNC | University of North Carolina at Charlotte (UNC Charlotte); R03CA270663 U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI); R21ES032966 U.S. Department of Health & Human Services | NIH | National Institute of Environmental Health Sciences (NIEHS); R21 ES032966 United States ES NIEHS NIH HHS; R01 CA225637 United States CA NCI NIH HHS; CR782 North West Cancer Research Fund (NWCR); R01CA225637 U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI)
المشرفين على المادة: EC 2.7.11.1 (Ataxia Telangiectasia Mutated Proteins)
EC 4.2.99.18 (DNA-(Apurinic or Apyrimidinic Site) Lyase)
0 (Xenopus Proteins)
تواريخ الأحداث: Date Created: 20240807 Date Completed: 20240807 Latest Revision: 20240810
رمز التحديث: 20240812
مُعرف محوري في PubMed: PMC11306256
DOI: 10.1038/s41467-024-50836-6
PMID: 39112456
قاعدة البيانات: MEDLINE
الوصف
تدمد:2041-1723
DOI:10.1038/s41467-024-50836-6