التفاصيل البيبلوغرافية
| العنوان: |
FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors. |
| المؤلفون: |
Jongsun Park, Jaejin Park, Suwang Jang, Seryun Kim, Sunghyung Kong, Jaeyoung Choi, Kyohun Ahn, Juhyeon Kim, Seungmin Lee, Sunggon Kim, Bongsoo Park, Kyongyong Jung, Soonok Kim, Seogchan Kang, Yong-Hwan Lee |
| المصدر: |
Bioinformatics; Apr2008, Vol. 24 Issue 7, p1024-1024, 1p |
| مصطلحات موضوعية: |
GENOMES, TRANSCRIPTION factors, OOMYCETES, GENOMICS |
| مستخلص: |
Summary: Genomes of more than 60 fungal species have been sequenced to date, yet there has been no systematic approach to analyze fungal transcription factors (TFs) kingdom widely. We developed a standardized pipeline for annotating TFs in fungal genomes. Resulting data have been archived in a new database termed the Fungal Transcription Factor Database (FTFD). In FTFD, 31 832 putative fungal TFs, identified from 62 fungal and 3 Oomycete species, were classified into 61 families and phylogenetically analyzed. The FTFD will serve as a community resource supporting comparative analyses of the distribution and domain structure of TFs within and across species. Availability: All data described in this study can be browsed through the FTFD web site at http://ftfd.snu.ac.kr/. Contact: yonglee@snu.ac.kr [ABSTRACT FROM AUTHOR] |
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| قاعدة البيانات: |
Complementary Index |
