Anticodon Table of the Chloroplast Genome and Identification of Putative Quadruplet Anticodons in Chloroplast tRNAs

التفاصيل البيبلوغرافية
العنوان: Anticodon Table of the Chloroplast Genome and Identification of Putative Quadruplet Anticodons in Chloroplast tRNAs
المؤلفون: Tapan Kumar Mohanta, Yugal Kishore Mohanta, Ahmed Al-Harrasi, Nanaocha Sharma
بيانات النشر: Cold Spring Harbor Laboratory, 2022.
سنة النشر: 2022
الوصف: The chloroplast genome of 5959 species was analyzed to construct the anticodon table of the chloroplast genome. Analysis of the chloroplast transfer ribonucleic acid (tRNA) revealed the presence of a putative quadruplet anticodon containing tRNAs in the chloroplast genome. The tRNAs with putative quadruplet anticodons were UAUG, UGGG, AUAA, GCUA, and GUUA, where the GUUA anticodon putatively encoded tRNAAsn. The study also revealed the complete absence of tRNA genes containing ACU, CUG, GCG, CUC, CCC, and CGG anticodons in the chloroplast genome from the species studied so far. The chloroplast genome was also found to encode tRNAs encoding N-formylmethionine (fMet), Ile2, selenocysteine, and pyrrolysine. The chloroplast genomes of mycoparasitic and heterotrophic plants have had heavy losses of tRNA genes. Furthermore, the chloroplast genome was also found to encode putative spacer tRNA, tRNA fragments (tRFs), tRNA-derived, stress-induced RNA (tiRNAs), and group I introns. An evolutionary analysis revealed that chloroplast tRNAs had evolved via multiple common ancestors and the GC% had more influence toward encoding the tRNA number in the chloroplast genome compared to the genome size.
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::a845b1f77c7866d40335834260c8c90d
https://doi.org/10.1101/2022.04.24.489293
رقم الأكسشن: edsair.doi...........a845b1f77c7866d40335834260c8c90d
قاعدة البيانات: OpenAIRE