Zonal methods for the parallel execution of range-limited N-body simulations

التفاصيل البيبلوغرافية
العنوان: Zonal methods for the parallel execution of range-limited N-body simulations
المؤلفون: Kevin J. Bowers, David E. Shaw, Ron O. Dror
المصدر: Journal of Computational Physics. 221:303-329
بيانات النشر: Elsevier BV, 2007.
سنة النشر: 2007
مصطلحات موضوعية: Numerical Analysis, Physics and Astronomy (miscellaneous), Computer science, Applied Mathematics, n-body problem, Computation, Upper and lower bounds, Computer Science Applications, Many-body problem, Computational Mathematics, Range (mathematics), Modeling and Simulation, Pairwise comparison, Algorithm, Massively parallel, Data transmission
الوصف: Particle simulations in fields ranging from biochemistry to astrophysics require the evaluation of interactions between all pairs of particles separated by less than some fixed interaction radius. The applicability of such simulations is often limited by the time required for calculation, but the use of massive parallelism to accelerate these computations is typically limited by inter-processor communication requirements. Recently, Snir [M. Snir, A note on N-body computations with cutoffs, Theor. Comput. Syst. 37 (2004) 295-318] and Shaw [D.E. Shaw, A fast, scalable method for the parallel evaluation of distance-limited pairwise particle interactions, J. Comput. Chem. 26 (2005) 1318-1328] independently introduced two distinct methods that offer asymptotic reductions in the amount of data transferred between processors. In the present paper, we show that these schemes represent special cases of a more general class of methods, and introduce several new algorithms in this class that offer practical advantages over all previously described methods for a wide range of problem parameters. We also show that several of these algorithms approach an approximate lower bound on inter-processor data transfer.
تدمد: 0021-9991
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::bf1869874f769b44e9fe86d0689f5b0c
https://doi.org/10.1016/j.jcp.2006.06.014
حقوق: CLOSED
رقم الأكسشن: edsair.doi...........bf1869874f769b44e9fe86d0689f5b0c
قاعدة البيانات: OpenAIRE