Molecular dynamics simulations and X-ray scattering show the κ-carrageenan disorder-to-order transition to be the formation of double-helices

التفاصيل البيبلوغرافية
العنوان: Molecular dynamics simulations and X-ray scattering show the κ-carrageenan disorder-to-order transition to be the formation of double-helices
المؤلفون: Benjamin P. Westberry, Bradley W. Mansel, Leif Lundin, M.A.K. Williams
المصدر: Carbohydrate polymers. 302
سنة النشر: 2022
مصطلحات موضوعية: Polymers and Plastics, X-Rays, Organic Chemistry, Materials Chemistry, Molecular Conformation, Molecular Dynamics Simulation, Carrageenan
الوصف: Recent molecular dynamics simulations, verified experimentally by solution-state x-ray scattering experiments, have found that κ-carrageenan chains contain helical secondary structure, akin to that found in the solid-state, even in aqueous solution. Furthermore, upon the addition of ions to single chains the simulations found no evidence that any conformational transitions take place. These findings challenge the long-held assumption that the so-called disorder-to-order transition in carrageenan systems involves a uni-molecular 'coil-to-helix transition'. Herein, the results of further molecular dynamics simulations undertaken using pairs of κ-carrageenan chains in 0.1 M NaI solutions are reported, and are validated experimentally using state-of-the-art solution-state WAXS experiments. From initially separated chains double-helices are shown to form, leading the authors to propose 'two single helices-to-stabilized double-helix' as a description of the molecular events taking place during the disorder-to-order transition.
تدمد: 1879-1344
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0a91162274f7370b0d56685990f12cb0
https://pubmed.ncbi.nlm.nih.gov/36604079
حقوق: CLOSED
رقم الأكسشن: edsair.doi.dedup.....0a91162274f7370b0d56685990f12cb0
قاعدة البيانات: OpenAIRE