أعرض في EDS

Complete mitogenome sequencing of Andaman buffalo: an endangered germplasm of Andaman and Nicobar Islands, India

التفاصيل البيبلوغرافية
العنوان: Complete mitogenome sequencing of Andaman buffalo: an endangered germplasm of Andaman and Nicobar Islands, India
المؤلفون: Arun Kumar De, Dhruba Malakar, Debasis Bhattacharya, Perumal Ponraj, Ramachandran Muthiyan, Anandamoy Kundu
المصدر: Journal of genetics. 98
سنة النشر: 2019
مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Germplasm, China, Buffaloes, Population, Endangered species, Zoology, Codon, Initiator, India, Biology, 01 natural sciences, 03 medical and health sciences, Start codon, RNA, Transfer, parasitic diseases, Genetics, Animals, education, Phylogeny, education.field_of_study, Base Composition, Phylogenetic tree, High-Throughput Nucleotide Sequencing, Genes, rRNA, Sequence Analysis, DNA, Ribosomal RNA, Stop codon, Mitochondria, 030104 developmental biology, Genes, Mitochondrial, RNA, Ribosomal, Threatened species, Genome, Mitochondrial, Codon, Terminator, Nucleic Acid Conformation, Sequence Alignment, 010606 plant biology & botany
الوصف: Andaman buffalo is an indigenous buffalo of Andaman and Nicobar Islands, India. Over the last decade, it has witnessed a rapid decline in population, necessitating its immediate characterization and conservation. The present study reports the complete mitogenome profile of Andaman buffalo which is 16,359 bp in length and comprised of 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs and two ribosomal RNAs. In addition, one $$\hbox {A}\,+\,\hbox {T}$$ rich region (D-loop) was also present. A biasness towards A and T base was observed in all the genes. All the PCGs except ND6 were present on heavy strand. Start codons for all the 13 PCGs were ATN codon and abbreviated/truncated stop codons were observed in ND1, ND2, COX3, ND3 and ND4. The phylogenetic analysis revealed that the Andaman buffalo is closely related to buffalo from India and China. The results from this study will help in sketching the conservation plan of the threatened breed.
تدمد: 0973-7731
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3ea9c55001b8a023eadc6a36ebf93f0b
https://pubmed.ncbi.nlm.nih.gov/31767814
حقوق: OPEN
رقم الأكسشن: edsair.doi.dedup.....3ea9c55001b8a023eadc6a36ebf93f0b
قاعدة البيانات: OpenAIRE
الوصف
تدمد:09737731