Characterization and phylogenetic analysis of the complete mitochondrial genome from Rock Scallop (Crassadoma gigantea) using next-generation sequencing
| العنوان: | Characterization and phylogenetic analysis of the complete mitochondrial genome from Rock Scallop (Crassadoma gigantea) using next-generation sequencing |
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| المؤلفون: | Shanmao Cao, Jingou Tong, Liao Dejie, Beide Fu, Dazuo Yang, Ying Zhou, Xiaomu Yu |
| المصدر: | Mitochondrial DNA. Part B, Resources article-version (VoR) Version of Record |
| بيانات النشر: | Taylor & Francis, 2018. |
| سنة النشر: | 2018 |
| مصطلحات موضوعية: | 0301 basic medicine, Mitochondrial DNA, biology, Phylogenetic tree, Crassadoma, phylogenetic relationship, 04 agricultural and veterinary sciences, Genetic code, biology.organism_classification, Genome, DNA sequencing, Stop codon, Rock scallop, 03 medical and health sciences, 030104 developmental biology, Evolutionary biology, mitochondrial genome, 040102 fisheries, Genetics, 0401 agriculture, forestry, and fisheries, Molecular Biology, Gene, Mitogenome Announcement, Research Article |
| الوصف: | In this study, the complete 18,495 bp mitochondrial genome was determined from Rock scallop (Crassadoma gigantea) using next-generation sequencing technology. The complete mitochondrial genome contained 12 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes, without ATP8 and D-loop, which was similar with most mitochondrial genomes of marine bivalve molluscs. Gene annotations, including gene order, genetic code, start and stop codons and codons bias, were identified. Phylogenetic tree was constructed using Neighbor-Joining (NJ) method based on the PCGs showed the present species clustered within the Pteriomorphia clade. This work should be of importance not only for the better understanding of the relationships within Pectinidae, but also for the development of useful genetic markers in Rock scallop aquaculture and restoration efforts. |
| اللغة: | English |
| تدمد: | 2380-2359 |
| URL الوصول: | https://explore.openaire.eu/search/publication?articleId=doi_dedup___::543a8376800ac3739890911c96fff8ef http://europepmc.org/articles/PMC7799609 |
| حقوق: | OPEN |
| رقم الأكسشن: | edsair.doi.dedup.....543a8376800ac3739890911c96fff8ef |
| قاعدة البيانات: | OpenAIRE |
PDF full text from Publisher | تدمد: | 23802359 |
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