Distributed Computing with Engineered Bacteria and Its Application in Solving Chemically Generated 2 × 2 Maze Problems

التفاصيل البيبلوغرافية
العنوان: Distributed Computing with Engineered Bacteria and Its Application in Solving Chemically Generated 2 × 2 Maze Problems
المؤلفون: Saswata Chakraborty, Deepro Bonnerjee, Kathakali Sarkar, Sangram Bagh
المصدر: ACS Synthetic Biology. 10:2456-2464
بيانات النشر: American Chemical Society (ACS), 2021.
سنة النشر: 2021
مصطلحات موضوعية: Bacteria, Logic, Computer science, Computation, Distributed computing, Truth table, Biomedical Engineering, General Medicine, Solver, Biochemistry, Genetics and Molecular Biology (miscellaneous), Chemical space, Computers, Molecular, Synthetic biology, Simple (abstract algebra), Gene Regulatory Networks, Synthetic Biology, Computational problem, Genetic Engineering, AND gate
الوصف: This work presented an application of genetic distributed computing, where an abstract computational problem was mapped on a complex truth table and solved using simple genetic circuits distributed among various cell populations. Maze generating and solving are challenging problems in mathematics and computing. Here, we mapped all the input-output matrices of a 2 × 2 mathematical maze on a 4-input-4-output truth table. The logic values of four chemical inputs determined the 16 different 2 × 2 maze problems on a chemical space. We created six multi-input synthetic genetic AND gates, which distributed among six cell populations and organized in a single layer. Those cell populations in a mixed culture worked as a computational solver, which solved the chemically generated maze problems by expressing or not expressing four different fluorescent proteins. The three available "solutions" were visualized by glowing bacteria, and for the 13 "no solution" cases, no bacteria glowed. Thus, our system not only solved the maze problems but also showed the number of solvable and unsolvable problems. This work may have significance in cellular computation and synthetic biology.
تدمد: 2161-5063
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6c990d4b4581ca94939d1af9f85c816f
https://doi.org/10.1021/acssynbio.1c00279
حقوق: CLOSED
رقم الأكسشن: edsair.doi.dedup.....6c990d4b4581ca94939d1af9f85c816f
قاعدة البيانات: OpenAIRE