Non-native ligands define the active site of Pennisetum glaucum (L.) R. Br dehydroascorbate reductase

التفاصيل البيبلوغرافية
العنوان: Non-native ligands define the active site of Pennisetum glaucum (L.) R. Br dehydroascorbate reductase
المؤلفون: Bhaba Krishna Das, Amit Kumar, A. Arockiasamy, Priyank Maindola, S.K. Jain, Srikrishna Mahanty, Mallireddy K. Reddy
المصدر: Biochemical and Biophysical Research Communications. 473:1152-1157
بيانات النشر: Elsevier BV, 2016.
سنة النشر: 2016
مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Pennisetum, Protein Conformation, Stereochemistry, Biophysics, Ascorbic Acid, Ligands, 01 natural sciences, Biochemistry, Substrate Specificity, 03 medical and health sciences, chemistry.chemical_compound, Oxidoreductase, Glycerol, Moiety, Molecular replacement, Molecular Biology, Glutathione Transferase, Plant Proteins, chemistry.chemical_classification, Binding Sites, biology, Active site, Cell Biology, Glutathione, biology.organism_classification, Enzyme Activation, Molecular Docking Simulation, 030104 developmental biology, Enzyme, chemistry, biology.protein, Protein Binding, 010606 plant biology & botany
الوصف: Dehydroascorbate reductase (DHAR), a member of the glutathione-S-transferase (GST) family, reduces dehydroascorbate (DHA) to ascorbate (AsA; Vitamin-C) in a glutathione (GSH)-dependent manner and in doing so, replenishes the critical AsA pool of the cell. To understand the enzyme mechanism in detail, we determined the crystal structure of a plant DHAR from Pennisetum glaucum (PgDHAR) using Iodide-Single Anomalous Dispersion (SAD) and Molecular replacement methods, in two different space groups. Here, we show PgDHAR in complex with two non-native ligands, viz. an acetate bound at the G-site, which resembles the γ-carboxyl moiety of GSH, and a glycerol at the H-site, which shares the backbone of AsA. We also show that, in the absence of bound native substrates, these non-native ligands help define the critical 'hook points' in the DHAR enzyme active site. Further, our data suggest that these non-native ligands can act as the logical bootstrapping points for iterative design of inhibitors/analogs for DHARs.
تدمد: 0006-291X
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6cec45d86e381709122197a033a1241b
https://doi.org/10.1016/j.bbrc.2016.04.031
حقوق: CLOSED
رقم الأكسشن: edsair.doi.dedup.....6cec45d86e381709122197a033a1241b
قاعدة البيانات: OpenAIRE