Isobaric tags for relative and absolute quantitation (iTRAQ)-based proteomic analysis of mRNA splicing relevant proteins in aging HSPCs

التفاصيل البيبلوغرافية
العنوان: Isobaric tags for relative and absolute quantitation (iTRAQ)-based proteomic analysis of mRNA splicing relevant proteins in aging HSPCs
المؤلفون: Yulei He, Ji Xia, Mingyi Zhao, Xiaolan Lian, Lina Zhang
المصدر: Aging Clinical and Experimental Research. 33:3123-3134
بيانات النشر: Springer Science and Business Media LLC, 2020.
سنة النشر: 2020
مصطلحات موضوعية: Proteomics, Senescence, Aging, PTBP1, Biology, Hematopoietic Stem Cells, Cell biology, 03 medical and health sciences, Haematopoiesis, 0302 clinical medicine, WBP11, PABPC1, RNA splicing, RNA, Messenger, 030212 general & internal medicine, Geriatrics and Gerontology, Progenitor cell, Gene, 030217 neurology & neurosurgery
الوصف: HSPC (hematopoietic stem/progenitor cell) aging was closely associated with the organism aging, senile diseases and hematopoietic related diseases. Therefore, study on HSPC aging is of great significance to further elucidate the mechanisms of aging and to treat hematopoietic disease resulting from HSPC aging. Little attention had been paid to mRNA splicing as a mechanism underlying HSPC senescence. We used our lab’s patented in vitro aging model of HSPCs to analyze mRNA splicing relevant protein alterations with iTRAQ-based proteomic analysis. We found that not only the notable mRNA splicing genes such as SR, hnRNP, WBP11, Sf3b1, Ptbp1 and U2AF1 but also the scarcely reported mRNA splicing relevant genes such as Rbmxl1, Dhx16, Pcbp2, Pabpc1 were significantly down-regulated. We further verified their gene expressions by qRT-PCR. In addition, we reported the effect of Spliceostatin A (SSA), which inhibits mRNA splicing in vivo and in vitro, on HSPC aging. It was concluded that mRNA splicing emerged as an important factor for the vulnerability of HSPC aging. This study improved our understanding of the role of mRNA splicing in the HSPC aging process.
تدمد: 1720-8319
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::90ce231bae53153fa00a1c9967fc6475
https://doi.org/10.1007/s40520-020-01509-z
حقوق: OPEN
رقم الأكسشن: edsair.doi.dedup.....90ce231bae53153fa00a1c9967fc6475
قاعدة البيانات: OpenAIRE