Search of regular sequences in promoters from eukaryotic genomes

التفاصيل البيبلوغرافية
العنوان: Search of regular sequences in promoters from eukaryotic genomes
المؤلفون: Eugene V. Korotkov, Andrew A. Shelenkov
المصدر: Computational Biology and Chemistry. 33:196-204
بيانات النشر: Elsevier BV, 2009.
سنة النشر: 2009
مصطلحات موضوعية: Genetics, Property (philosophy), Base Sequence, Sequence analysis, Molecular Sequence Data, Organic Chemistry, Genomics, Sequence alignment, Sequence Analysis, DNA, Computational biology, Term (logic), Biology, Biochemistry, Genome, DNA sequencing, Computational Mathematics, Annotation, Structural Biology, Animals, Humans, Promoter Regions, Genetic, Sequence Alignment, Algorithms
الوصف: In this paper, the notion of ''regularity'' is introduced to describe the structural features of DNA sequences. This notion expands the ''latent periodicity'' term. The novel method for revealing regularity based on the runs test is described. The search of regular sequences in eukaryotic promoters has shown that more than 60% of them possess a regularity property on statistically significant level. Possible biological functions of regularity are discussed together with the possibility of using this characteristic for performing promoter annotation.
تدمد: 1476-9271
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::94dc1755b5324781d76cd1bb88db4b16
https://doi.org/10.1016/j.compbiolchem.2009.03.001
حقوق: CLOSED
رقم الأكسشن: edsair.doi.dedup.....94dc1755b5324781d76cd1bb88db4b16
قاعدة البيانات: OpenAIRE