Molecular cloning and characterization of two novel NAC genes from Mikania micrantha (Asteraceae)

التفاصيل البيبلوغرافية
العنوان: Molecular cloning and characterization of two novel NAC genes from Mikania micrantha (Asteraceae)
المؤلفون: Zhu Gf, Lü Fb, Li Dm, Jing Wang, Peng Sl
المصدر: Genetics and molecular research : GMR. 11(4)
سنة النشر: 2012
مصطلحات موضوعية: Molecular Sequence Data, Gene Expression, Molecular cloning, Biology, Xanthomonas campestris, Rapid amplification of cDNA ends, Gene Expression Regulation, Plant, Stress, Physiological, Botany, Genetics, Arabidopsis thaliana, Amino Acid Sequence, Cloning, Molecular, Mikania, Mikania micrantha, Molecular Biology, Gene, Phylogeny, Plant Diseases, Plant Proteins, Cell Nucleus, Base Sequence, Plant Stems, Sequence Homology, Amino Acid, Nucleic acid sequence, Intron, General Medicine, Sequence Analysis, DNA, biology.organism_classification, Fusion protein, Molecular biology, Organ Specificity, Host-Pathogen Interactions, Transcription Factors
الوصف: NAC proteins, which are plant-specific transcription factors, have been identified to play important roles in plant response to stresses and in plant development. The full-length cDNAs that encode 2 putative NAC proteins, designated as MmATAF1 and MmNAP, respectively, were cloned from Mikania micrantha by rapid amplification of cDNA ends. The full-length cDNAs of MmATAF1 and MmNAP were 1329 and 1072 bp, respectively, and they encoded deduced proteins of 260- and 278-amino acid residues, respectively. The proteins MmATAF1 and MmNAP had a calculated molecular mass of 29.81 and 32.55 kDa and a theoretical isoelectric point of 7.08 and 9.00, respectively. Nucleotide sequence data indicated that both MmATAF1 and MmNAP contained 2 introns and 3 exons and that they shared a conserved genomic organization. Multiple sequence alignments showed that MmATAF1 showed high sequence identity with ATAF1 of Arabidopsis thaliana (61%) and that MmNAP showed high sequence identity with NAP of A. thaliana (67%) and CitNAC of Citrus sinensis Osbeck (62%). Phylogenetic analysis showed that the predicted MmATAF1 and MmNAP proteins were classified into the ATAF and NAP subgroups, respectively. Transient expression analysis of onion epidermal cells indicated nuclear localization of both MmATAF1-GFP and MmNAP-GFP fusion proteins. Semi-quantitative reverse transcription polymerase chain reaction (RT-PCR) analysis indicated that MmATAF1 was expressed in all the tissues tested, but in varying abundance, while MmNAP was specifically expressed in stems, petioles, shoots, and leaves, but not in roots. The transcript levels of MmATAF1 and MmNAP in shoots and in infected stems were induced and strengthened by wounding, exogenous ZnSO(4), abscisic acid, salicylic acid, and Cuscuta campestris infection on the basis of semi-quantitative RT-PCR and real-time PCR analyses, respectively. Collectively, these results indicated that MmATAF1 and MmNAP, besides having roles in M. micrantha adaptation to C. campestris infection and abiotic stresses, also integrated signals derived from both C. campestris infection and abiotic stresses.
تدمد: 1676-5680
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b2a55f78e54f828f6cdeb65e7a92a07f
https://pubmed.ncbi.nlm.nih.gov/23079980
حقوق: OPEN
رقم الأكسشن: edsair.doi.dedup.....b2a55f78e54f828f6cdeb65e7a92a07f
قاعدة البيانات: OpenAIRE