High-throughput sequencing of microbial community diversity in soil, grapes, leaves, grape juice and wine of grapevine from China
| العنوان: | High-throughput sequencing of microbial community diversity in soil, grapes, leaves, grape juice and wine of grapevine from China |
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| المؤلفون: | Yin-zhuo Yan, Jie Xue, Tian Ge, Wan Zou, Yu-jie Wei, Wei Wang, Li-ye Wang, Wen-rui Ma, Wu Yun |
| المصدر: | PLoS ONE PLoS ONE, Vol 13, Iss 3, p e0193097 (2018) |
| بيانات النشر: | Public Library of Science, 2018. |
| سنة النشر: | 2018 |
| مصطلحات موضوعية: | 0301 basic medicine, Leaves, Microorganism, lcsh:Medicine, Aureobasidium, Wine, Artificial Gene Amplification and Extension, Plant Science, Polymerase Chain Reaction, Agricultural Soil Science, Medicine and Health Sciences, Vitis, lcsh:Science, Soil Microbiology, education.field_of_study, Multidisciplinary, biology, Ecology, Alcoholic Beverages, Plant Anatomy, food and beverages, Eukaryota, High-Throughput Nucleotide Sequencing, Agriculture, Plants, Fruit and Vegetable Juices, Horticulture, Pleosporaceae, Soil microbiology, Oenococcus, Research Article, China, Grapes, Ecological Metrics, Population, Microbial Consortia, Soil Science, Research and Analysis Methods, Fruits, Beverages, 03 medical and health sciences, Food microbiology, education, Molecular Biology Techniques, Molecular Biology, Nutrition, Bacteria, lcsh:R, fungi, Ecology and Environmental Sciences, Organisms, Fungi, Biology and Life Sciences, Species Diversity, biology.organism_classification, Diet, 030104 developmental biology, Food Microbiology, lcsh:Q |
| الوصف: | In this study Illumina MiSeq was performed to investigate microbial diversity in soil, leaves, grape, grape juice and wine. A total of 1,043,102 fungal Internal Transcribed Spacer (ITS) reads and 2,422,188 high quality bacterial 16S rDNA sequences were used for taxonomic classification, revealed five fungal and eight bacterial phyla. At the genus level, the dominant fungi were Ascomycota, Sordariales, Tetracladium and Geomyces in soil, Aureobasidium and Pleosporaceae in grapes leaves, Aureobasidium in grape and grape juice. The dominant bacteria were Kaistobacter, Arthrobacter, Skermanella and Sphingomonas in soil, Pseudomonas, Acinetobacter and Kaistobacter in grape and grapes leaves, and Oenococcus in grape juice and wine. Principal coordinate analysis showed structural separation between the composition of fungi and bacteria in all samples. This is the first study to understand microbiome population in soil, grape, grapes leaves, grape juice and wine in Xinjiang through High-throughput Sequencing and identify microorganisms like Saccharomyces cerevisiae and Oenococcus spp. that may contribute to the quality and flavor of wine. |
| اللغة: | English |
| تدمد: | 1932-6203 |
| URL الوصول: | https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cf94e7e752f790e8e3fcf099f677727e http://europepmc.org/articles/PMC5863948 |
| حقوق: | OPEN |
| رقم الأكسشن: | edsair.doi.dedup.....cf94e7e752f790e8e3fcf099f677727e |
| قاعدة البيانات: | OpenAIRE |
| تدمد: | 19326203 |
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