Altering the binding determinant on the interdigitating loop of mandelate racemase shifts specificity towards that of d-tartrate dehydratase

التفاصيل البيبلوغرافية
العنوان: Altering the binding determinant on the interdigitating loop of mandelate racemase shifts specificity towards that of d-tartrate dehydratase
المؤلفون: Mitesh Nagar, Joshua A. Hayden, Einat Sagey, George Worthen, Mika Park, Amar Nath Sharma, Christopher M. Fetter, Oliver P. Kuehm, Stephen L. Bearne
المصدر: Archives of biochemistry and biophysics. 718
سنة النشر: 2021
مصطلحات موضوعية: Models, Molecular, Kinetics, Binding Sites, Biophysics, Racemases and Epimerases, Molecular Biology, Biochemistry, Tartrates, Catalysis, Hydro-Lyases, Substrate Specificity
الوصف: The enolase superfamily (ENS) has served as a paradigm for understanding how enzymes that share a conserved structure, as well as a common partial reaction (i.e., metal-assisted, Brønsted base-catalyzed enol(ate) formation), evolved from a common progenitor to catalyze mechanistically diverse reactions. Enzymes of the mandelate racemase (MR)-subgroup of the ENS share interdigitating loops between adjacent, 2-fold symmetry-related protomers of the tightly associated homodimers that comprise their quaternary structures. For the MR-subgroup members MR and d-tartrate dehydratase (TarD), the tip of the loop contributes a binding determinant to the adjacent active site (i.e., Leu 93 and Lys 102, respectively). To assess the role of Leu 93 of MR in substrate specificity and catalysis, we constructed L93 variants bearing hydrophobic (L93A, L93F, and L93W), polar neutral (L93N), acidic (L93D), or basic (L93K and L93R) residues at position 93. Gel filtration-HPLC revealed that wild-type MR and all L93 MR variants, apart from L93R MR (dimeric), were tetrameric in solution. The catalytic efficiency (k
تدمد: 1096-0384
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e24f538d321659a0dfd09e884a8f0f0c
https://pubmed.ncbi.nlm.nih.gov/35016855
حقوق: CLOSED
رقم الأكسشن: edsair.doi.dedup.....e24f538d321659a0dfd09e884a8f0f0c
قاعدة البيانات: OpenAIRE