A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance
| العنوان: | A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance |
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| المؤلفون: | Sha Lu, Jisu Jin, Minglu Yang, Xianxin Zhao, Mengbo Guo, Chunyan Jiang, Renci Xiong, Bo Liu, Chuanlin Yin, Wei Fan, Jinding Liu, Jérôme Olivares, Kejian Lin, Kang Wang, Jiapeng Luo, Rui Tang, Longfei Chen, Myriam Siegwart, Xiaoqing Xian, Camille Meslin, Mark Blaxter, František Marec, Mingli Ye, Guirong Wang, Yu Xi, Pierre Franck, Lang Liu, Wang Shuping, Jianyang Guo, Guoliang Shi, Likai Feng, James R. Walters, Lino Ometto, Guifen Zhang, Nianwan Yang, Kang He, Jinmeng Guo, Jianru Shen, Cong Huang, Maohua Chen, Fei Li, Xiong Peng, Wei Liu, Martina Dalíková, Sandrine Maugin, Emmanuelle Jacquin-Joly, Hai-Xia Zhan, Liuqi Aloy Gu, Fanghao Wan, Omar Rota-Stabelli, Meizhen Li, Wanxue Liu, Feiling Liu, Gianfranco Anfora, Qiang Wu, Wanqiang Qian, Ruizheng Tian, Longsheng Xing, Petr Nguyen |
| المساهمون: | State Key Laboratory for Biology of Plant Diseases and Insect Pests, Chinese Academy of Agricultural Sciences (CAAS), Zhejiang University, State key laboratory of Integrated Management of pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences [Changchun Branch] (CAS), Northwest A&F University, Hunan Agricultural University, Fondazione Edmund Mach - Edmund Mach Foundation [Italie] (FEM), Technical Centre for Animal Plant and Food Inspection and Quarantine, Partenaires INRAE, University of Kansas [Lawrence] (KU), Institut d'écologie et des sciences de l'environnement de Paris (iEES Paris), Institut National de la Recherche Agronomique (INRA)-Sorbonne Université (SU)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Centre National de la Recherche Scientifique (CNRS), Unité de recherche Plantes et Systèmes de Culture Horticoles (PSH), Institut National de la Recherche Agronomique (INRA), Department of Biology and Biotechnology, University of Pavia, University of Trento, University of Edinburgh, Biology Centre of the Czech Academy of Sciences (BIOLOGY CENTRE CAS), Czech Academy of Sciences [Prague] (CAS), Faculty of Science, University of South Bohemia, Xinjiang Academy of Agricultural and Reclamation Sciences, Qingdao Agricultural University, Zhejiang Shuren University, Tarim University, National Key Research and Development Project of China 2016YFC1200602 2017YFC1200602 2016YFC1201200 National Natural Science Foundation of China 31672033, Università degli Studi di Pavia = University of Pavia (UNIPV), Università degli Studi di Trento (UNITN) |
| المصدر: | Nature Communications 1 (10), . (2019) Nature Communications Nature Communications, Vol 10, Iss 1, Pp 1-14 (2019) Nature Communications, Nature Publishing Group, 2019, 10 (1), ⟨10.1038/s41467-019-12175-9⟩ Wan, F, Yin, C, Tang, R, Chen, M, Wu, Q, Huang, C, Qian, W, Rota-stabelli, O, Yang, N, Wang, S, Wang, G, Zhang, G, Guo, J, Gu, L, Chen, L, Xing, L, Xi, Y, Liu, F, Lin, K, Guo, M, Liu, W, He, K, Tian, R, Jacquin-joly, E, Franck, P, Siegwart, M, Ometto, L, Anfora, G, Blaxter, M, Meslin, C, Nguyen, P, Dalíková, M, Marec, F, Olivares, J, Maugin, S, Shen, J, Liu, J, Guo, J, Luo, J, Liu, B, Fan, W, Feng, L, Zhao, X, Peng, X, Wang, K, Liu, L, Zhan, H, Liu, W, Shi, G, Jiang, C, Jin, J, Xian, X, Lu, S, Ye, M, Li, M, Yang, M, Xiong, R, Walters, J R & Li, F 2019, ' A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance ', Nature Communications, vol. 10, no. 1 . https://doi.org/10.1038/s41467-019-12175-9 Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-12175-9⟩ |
| سنة النشر: | 2019 |
| مصطلحات موضوعية: | 0106 biological sciences, 0301 basic medicine, Insecticides, Codling moth, [SDV]Life Sciences [q-bio], Genome, Insect, General Physics and Astronomy, Sequence assembly, odorant receptors, lepidoptera-tortricidae, Moths, Receptors, Odorant, 01 natural sciences, Genome, Pheromones, Insecticide Resistance, chemistry.chemical_compound, codling moth, Gene Duplication, read alignment, lcsh:Science, genes, Promoter Regions, Genetic, Genetics, Multidisciplinary, Genomics, Chemical ecology, Settore AGR/11 - ENTOMOLOGIA GENERALE E APPLICATA, Sex pheromone, [SDE]Environmental Sciences, Insect Proteins, l. lepidoptera, Science, Biology, 010603 evolutionary biology, Polymorphism, Single Nucleotide, General Biochemistry, Genetics and Molecular Biology, Article, 03 medical and health sciences, sex-pheromone, Animals, improvement, Gene, deltamethrin, General Chemistry, biology.organism_classification, Chromosomes, Insect, 030104 developmental biology, Deltamethrin, chemistry, lcsh:Q, Entomology |
| الوصف: | The codling moth Cydia pomonella, a major invasive pest of pome fruit, has spread around the globe in the last half century. We generated a chromosome-level scaffold assembly including the Z chromosome and a portion of the W chromosome. This assembly reveals the duplication of an olfactory receptor gene (OR3), which we demonstrate enhances the ability of C. pomonella to exploit kairomones and pheromones in locating both host plants and mates. Genome-wide association studies contrasting insecticide-resistant and susceptible strains identify hundreds of single nucleotide polymorphisms (SNPs) potentially associated with insecticide resistance, including three SNPs found in the promoter of CYP6B2. RNAi knockdown of CYP6B2 increases C. pomonella sensitivity to two insecticides, deltamethrin and azinphos methyl. The high-quality genome assembly of C. pomonella informs the genetic basis of its invasiveness, suggesting the codling moth has distinctive capabilities and adaptive potential that may explain its worldwide expansion. The codling moth, Cydia pomonella, is one of the major pests of pome fruit (apples and pears) and walnuts. Here, the authors sequence and analyze its genome, providing insights on olfactory and detoxification processes that may underlie its worldwide expansion. |
| وصف الملف: | application/pdf |
| اللغة: | English |
| تدمد: | 2041-1723 |
| URL الوصول: | https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e50c1825c2144f31621268eb6f9fee17 http://prodinra.inra.fr/record/484613 |
| حقوق: | OPEN |
| رقم الأكسشن: | edsair.doi.dedup.....e50c1825c2144f31621268eb6f9fee17 |
| قاعدة البيانات: | OpenAIRE |
| تدمد: | 20411723 |
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