Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses
| العنوان: | Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses |
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| المؤلفون: | Jeffrey A. Rollins, Ken Shirasu, Jochen Kleemann, Emiel Ver Loren van Themaat, Narmada Shenoy, Hiroyuki Takahara, Christian Becker, Maria F. Torres, Zehua Chen, Noam Alkan, Martin B. Dickman, Michael Place, Pamela Gan, Christopher L. Schardl, Neil Moore, Michael R. Thon, Richard J. Howard, Christian Koch, Lucia Alvarado-Balderrama, Stefan G. Amyotte, Christopher Bauser, Robert H. Proctor, James A. Sweigard, Audrey D. Law, Bruce W. Birren, Jaeyoung Choi, Daniel G. Panaccione, Serenella A. Sukno, Itay Miyara, Lars M. Voll, Karl Nordström, Li-Jun Ma, Yasuyuki Kubo, Usha Rani Sikhakolli, Sarah Young, Mark A. Farman, Yong-Hwan Lee, Ester Alvarenga Santos Buiate, Ulla Neumann, Ulrike Damm, Mehdi Kabbage, H. Charlotte van der Does, Bernard Henrissat, Kurt Stüber, Dov Prusky, Marc-Henri Lebrun, Richard J. O'Connell, Shiguo Zhou, Richard Reinhardt, Stéphane Hacquard, Jonathan P. Duvick, Gabriel E. Rech, Frances Trail, Steve Rounsley, David C. Schwartz, Yoshitaka Takano, Paul Schulze-Lefert, Jo Anne Crouch, Ralph Panstruga, Barbara Kracher, David I. Heiman, Janine Altmüller, Jingze Zhang, Qiandong Zeng, Isa Will, Lynn Epstein, Lisa J. Vaillancourt |
| المساهمون: | Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research (MPIPZ), Centro Hispano-Luso de Investigaciones Agrarias, Departamento de Microbiología y Genétic, Universidad de Salamanca, Department of Plant Pathology, University of Kentucky (UK), 1. Department of Plant Microbe Interactions, Fungal Biodiversity Centre, 3. Department of Plant Pathology, Kentucky State University, University of California (UC), 6. Department of Postharvest Science of Fresh Produce, Agricultural Research Organizati, Agricultural Research Organization, Cologne Center for Genomics, University of Cologne, Broad Institute [Cambridge], Harvard University-Massachusetts Institute of Technology (MIT), GATC Biotech AG [Konstanz], Center for Genomics, Seoul National University [Seoul] (SNU), Systematic Mycology and Microbiology Laboratory, United States Department of Agriculture, DuPont Agricultural Biotechnology, Pioneer Hi-Bred International, Plant Immunity Research Group, RIKEN Plant Science Center, Architecture et fonction des macromolécules biologiques (AFMB), Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), 15. Department of Plant Pathology and Microbiology, Institute for Plant Genomics and Biotechnology, Borlaug Genomics and Bioinformatics Center, Texas, Texas A&M University System, Department of Biology, Division of Biochemistry, Friedrich-Alexander, Friedrich-Alexander Universität Erlangen-Nürnberg (FAU), Laboratory of Plant Pathology, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University (KPU), BIOlogie et GEstion des Risques en agriculture (BIOGER), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, 6. Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, Department of Computer Science, Central Microscopy, Department of Plant Developmental Biology, Division of Plant and Soil Sciences, West Virginia University, Institute for Biology I, Unit of Plant Molecular Cell Biology, Rheinisch-Westfälische Technische Hochschule, Rheinisch-Westfälische Technische Hochschule Aachen University (RWTH), Laboratory for Molecular and Computational Genomics, University of Wisconsin-Madison, Agriculture Research Service, National Center for Agricultural Utilization Research, 2. Centro Hispano-Luso de Investigaciones Agrarias, Departamento de Microbiología y Genética, Max Planck-Genome-centre Cologne (MP-GC), Max-Planck-Gesellschaft, University of Florida [Gainesville] (UF), Department of Plant Biology, Michigan State University [East Lansing], Michigan State University System-Michigan State University System, 12. Pioneer Hi-Bred International, Laboratory of Plant Pathology, Graduate School of Agriculture, Kyoto University, Department of Biology, Division of Biochemistry, Department of Plant Pathology and Microbiology, Institute for Plant Genomics and Biotechnology, University of Kentucky, University of California, Harvard University [Cambridge]-Massachusetts Institute of Technology (MIT), Kyoto Prefectural University, AgroParisTech-Institut National de la Recherche Agronomique (INRA), Rheinisch-Westfälische Technische Hochschule Aachen (RWTH), University of Florida [Gainesville], Kyoto University [Kyoto], Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Institut National de la Recherche Agronomique (INRA), Vaillancourt, Lisa J |
| المصدر: | Nature Genetics Nature Genetics, 2012, 44 (09), pp.1060-1065. ⟨10.1038/ng.2372⟩ Nature Genetics, Nature Publishing Group, 2012, 44 (09), pp.1060-1065. ⟨10.1038/ng.2372⟩ Nature Genetics 09 (44), 1060-1065. (2012) Nature Genetics, 44(9), 1060-1065. Nature Publishing Group |
| بيانات النشر: | HAL CCSD, 2012. |
| سنة النشر: | 2012 |
| مصطلحات موضوعية: | operative targe, [SDV]Life Sciences [q-bio], Arabidopsis, specificity, Models, Biological, Transcriptome, 03 medical and health sciences, host status, Gene Expression Regulation, Fungal, Genetics, Colletotrichum, Cluster Analysis, Secondary metabolism, Gene, Colletotrichum higginsianum, Phylogeny, 030304 developmental biology, Plant Diseases, Comparative genomics, 0303 health sciences, biology, 030306 microbiology, nonhost, Gene Expression Profiling, fungi, Colletotrichum orbiculare, Fungal genetics, Gene Expression Regulation, Developmental, food and beverages, Sequence Analysis, DNA, biology.organism_classification, basal resistance, Host-Pathogen Interactions, Mitosporic Fungi, Genome, Fungal, effectors |
| الوصف: | Colletotrichum species are fungal pathogens that devastate crop plants worldwide. Host infection involves the differentiation of specialized cell types that are associated with penetration, growth inside living host cells (biotrophy) and tissue destruction (necrotrophy). We report here genome and transcriptome analyses of Colletotrichum higginsianum infecting Arabidopsis thaliana and Colletotrichum graminicola infecting maize. Comparative genomics showed that both fungi have large sets of pathogenicity-related genes, but families of genes encoding secreted effectors, pectin-degrading enzymes, secondary metabolism enzymes, transporters and peptidases are expanded in C. higginsianum. Genome-wide expression profiling revealed that these genes are transcribed in successive waves that are linked to pathogenic transitions: effectors and secondary metabolism enzymes are induced before penetration and during biotrophy, whereas most hydrolases and transporters are upregulated later, at the switch to necrotrophy. Our findings show that preinvasion perception of plant-derived signals substantially reprograms fungal gene expression and indicate previously unknown functions for particular fungal cell types. |
| وصف الملف: | application/pdf |
| اللغة: | English |
| تدمد: | 1061-4036 1546-1718 |
| URL الوصول: | https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f57d031cfbfa963fdcfee8c81857f21a https://hal.science/hal-01191183 |
| حقوق: | OPEN |
| رقم الأكسشن: | edsair.doi.dedup.....f57d031cfbfa963fdcfee8c81857f21a |
| قاعدة البيانات: | OpenAIRE |
| تدمد: | 10614036 15461718 |
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