Probing the Origins of Two-State Folding

التفاصيل البيبلوغرافية
العنوان: Probing the Origins of Two-State Folding
المؤلفون: Lane, Thomas J., Schwantes, Christian R., Beauchamp, Kyle A., Pande, Vijay S.
سنة النشر: 2013
المجموعة: Physics (Other)
Quantitative Biology
مصطلحات موضوعية: Physics - Biological Physics, Quantitative Biology - Biomolecules
الوصف: Many protein systems fold in a two-state manner. Random models, however, rarely display two-state kinetics and thus such behavior should not be accepted as a default. To date, many theories for the prevalence of two-state kinetics have been presented, but none sufficiently explain the breadth of experimental observations. A model, making a minimum of assumptions, is introduced that suggests two-state behavior is likely for any system with an overwhelmingly populated native state. We show two-state folding is emergent and strengthened by increasing the occupancy population of the native state. Further, the model exhibits a hub-like behavior, with slow interconversions between unfolded states. Despite this, the unfolded state equilibrates quickly relative to the folding time. This apparent paradox is readily understood through this model. Finally, our results compare favorable with experimental measurements of protein folding rates as a function of chain length and Keq, and provide new insight into these results.
نوع الوثيقة: Working Paper
DOI: 10.1063/1.4823502
URL الوصول: http://arxiv.org/abs/1305.0963
رقم الأكسشن: edsarx.1305.0963
قاعدة البيانات: arXiv