Effects of macromolecular crowding on the collapse of biopolymers

التفاصيل البيبلوغرافية
العنوان: Effects of macromolecular crowding on the collapse of biopolymers
المؤلفون: Kang, Hongsuk, Pincus, Philip A., Hyeon, Changbong, Thirumalai, D.
المصدر: Phys. Rev. Lett. (2015) vol. 114, 068303
سنة النشر: 2014
المجموعة: Condensed Matter
Physics (Other)
Quantitative Biology
مصطلحات موضوعية: Condensed Matter - Soft Condensed Matter, Physics - Biological Physics, Quantitative Biology - Biomolecules
الوصف: Experiments show that macromolecular crowding modestly reduces the size of intrinsically disordered proteins (IDPs) even at volume fraction ($\phi$) similar to that in the cytosol whereas DNA undergoes a coil-to-globule transition at very small $\phi$. We show using a combination of scaling arguments and simulations that the polymer size $\overline{R}_g(\phi)$ depends on $x = \overline{R}_g(0)/D$ where $D$ is the $\phi$-dependent distance between the crowders. If $x\lesssim \mathcal{O}(1)$, there is only a small decrease in $\overline{R}_g(\phi)$ as $\phi$ increases. When $x\gg \mathcal{O}(1)$, a cooperative coil-to-globule transition is induced. Our theory quantitatively explains a number of experiments.
Comment: 7 pages 5 figures, accepted in Phys. Rev. Lett
نوع الوثيقة: Working Paper
DOI: 10.1103/PhysRevLett.114.068303
URL الوصول: http://arxiv.org/abs/1409.5663
رقم الأكسشن: edsarx.1409.5663
قاعدة البيانات: arXiv
الوصف
DOI:10.1103/PhysRevLett.114.068303