Sampling molecular conformations and dynamics in a multi-user virtual reality framework

التفاصيل البيبلوغرافية
العنوان: Sampling molecular conformations and dynamics in a multi-user virtual reality framework
المؤلفون: Connor, Michael O, Deeks, Helen M., Dawn, Edward, Metatla, Oussama, Roudaut, Anne, Sutton, Matthew, Glowacki, Becca Rose, Sage, Rebecca, Tew, Philip, Wonnacott, Mark, Bates, Phil, Mulholland, Adrian J., Glowacki, David R.
المصدر: Science Advances, Jun 2018: Vol. 4, no. 6, eaat2731
سنة النشر: 2018
المجموعة: Computer Science
Physics (Other)
مصطلحات موضوعية: Physics - Chemical Physics, Computer Science - Human-Computer Interaction, Physics - Biological Physics, Physics - Physics Education
الوصف: We describe a framework for interactive molecular dynamics in a multiuser virtual reality environment, combining rigorous cloud-mounted physical atomistic simulation with commodity virtual reality hardware, which we have made accessible to readers (see isci.itch.io/nsb-imd). It allows users to visualize and sample, with atomic-level precision, the structures and dynamics of complex molecular structures 'on the fly', and to interact with other users in the same virtual environment. A series of controlled studies, wherein participants were tasked with a range of molecular manipulation goals (threading methane through a nanotube, changing helical screw-sense, and tying a protein knot), quantitatively demonstrate that users within the interactive VR environment can complete sophisticated molecular modelling tasks more quickly than they can using conventional interfaces, especially for molecular pathways and structural transitions whose conformational choreographies are intrinsically 3d. This framework should accelerate progress in nanoscale molecular engineering areas such as drug development, synthetic biology, and catalyst design. More broadly, our findings highlight VR's potential in scientific domains where 3d dynamics matter, spanning research and education.
Comment: 5 pages, 3 figures, 19 pages Supporting Info
نوع الوثيقة: Working Paper
DOI: 10.1126/sciadv.aat2731
URL الوصول: http://arxiv.org/abs/1801.02884
رقم الأكسشن: edsarx.1801.02884
قاعدة البيانات: arXiv