Non-Autoregressive Electron Redistribution Modeling for Reaction Prediction

التفاصيل البيبلوغرافية
العنوان: Non-Autoregressive Electron Redistribution Modeling for Reaction Prediction
المؤلفون: Bi, Hangrui, Wang, Hengyi, Shi, Chence, Coley, Connor, Tang, Jian, Guo, Hongyu
سنة النشر: 2021
المجموعة: Computer Science
Physics (Other)
مصطلحات موضوعية: Physics - Chemical Physics, Computer Science - Computational Engineering, Finance, and Science, Computer Science - Machine Learning
الوصف: Reliably predicting the products of chemical reactions presents a fundamental challenge in synthetic chemistry. Existing machine learning approaches typically produce a reaction product by sequentially forming its subparts or intermediate molecules. Such autoregressive methods, however, not only require a pre-defined order for the incremental construction but preclude the use of parallel decoding for efficient computation. To address these issues, we devise a non-autoregressive learning paradigm that predicts reaction in one shot. Leveraging the fact that chemical reactions can be described as a redistribution of electrons in molecules, we formulate a reaction as an arbitrary electron flow and predict it with a novel multi-pointer decoding network. Experiments on the USPTO-MIT dataset show that our approach has established a new state-of-the-art top-1 accuracy and achieves at least 27 times inference speedup over the state-of-the-art methods. Also, our predictions are easier for chemists to interpret owing to predicting the electron flows.
نوع الوثيقة: Working Paper
URL الوصول: http://arxiv.org/abs/2106.07801
رقم الأكسشن: edsarx.2106.07801
قاعدة البيانات: arXiv