A necessary condition for non-monotonic dose response, with an application to a kinetic proofreading model -- Extended version

التفاصيل البيبلوغرافية
العنوان: A necessary condition for non-monotonic dose response, with an application to a kinetic proofreading model -- Extended version
المؤلفون: Yu, Polly Y., Sontag, Eduardo D.
سنة النشر: 2024
المجموعة: Mathematics
Quantitative Biology
مصطلحات موضوعية: Quantitative Biology - Molecular Networks, Mathematics - Optimization and Control
الوصف: Steady state non-monotonic ("biphasic") dose responses are often observed in experimental biology, which raises the control-theoretic question of identifying which possible mechanisms might underlie such behaviors. It is well known that the presence of an incoherent feedforward loop (IFFL) in a network may give rise to a non-monotonic response. It has been conjectured that this condition is also necessary, i.e. that a non-monotonic response implies the existence of an IFFL. In this paper, we show that this conjecture is false, and in the process prove a weaker version: that either an IFFL must exist or both a positive loop and a negative feedback loop must exist. Towards this aim, we give necessary and sufficient conditions for when minors of a symbolic matrix have mixed signs. Finally, we study in full generality when a model of immune T-cell activation could exhibit a steady state non-monotonic dose response.
Comment: Appendix included
نوع الوثيقة: Working Paper
URL الوصول: http://arxiv.org/abs/2403.13862
رقم الأكسشن: edsarx.2403.13862
قاعدة البيانات: arXiv