دورية أكاديمية

Whole-Genome Sequencing of Mycobacterium tuberculosis Isolates from Diabetic and Non-Diabetic Patients with Pulmonary Tuberculosis

التفاصيل البيبلوغرافية
العنوان: Whole-Genome Sequencing of Mycobacterium tuberculosis Isolates from Diabetic and Non-Diabetic Patients with Pulmonary Tuberculosis
المؤلفون: Ranjitha Shankaregowda, Yuan Hu Allegretti, Mahadevaiah Neelambike Sumana, Morubagal Raghavendra Rao, Eva Raphael, Padukudru Anand Mahesh, Lee W. Riley
المصدر: Microorganisms, Vol 11, Iss 8, p 1881 (2023)
بيانات النشر: MDPI AG, 2023.
سنة النشر: 2023
المجموعة: LCC:Biology (General)
مصطلحات موضوعية: Mycobacterium tuberculosis, whole-genome sequencing, phylogenetic analysis, Biology (General), QH301-705.5
الوصف: The association of tuberculosis and type 2 diabetes mellitus has been a recognized re-emerging challenge in management of the convergence of the two epidemics. Though much of the literature has studied this association, there is less knowledge in the field of genetic diversities that might occur in strains infecting tuberculosis patients with and without diabetes. Our study focused on determining the extent of diversity of genotypes of Mycobacterium tuberculosis in both these categories of patients. We subjected 55 M. tuberculosis isolates from patients diagnosed with pulmonary TB with and without type 2 diabetes mellitus to whole-genome sequencing on Illumina Hi Seq platform. The most common lineage identified was lineage 1, the Indo-Oceanic lineage (n = 22%), followed by lineage 4, the Euro-American lineage (n = 18, 33%); lineage 3, the East-African Indian lineage (n = 13, 24%); and lineage 2, the East-Asian lineage (n = 1, 2%). There were no significant differences in the distribution of lineages in both diabetics and non-diabetics in the South Indian population, and further studies involving computational analysis and comparative transcriptomics are needed to provide deeper insights.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2076-2607
Relation: https://www.mdpi.com/2076-2607/11/8/1881; https://doaj.org/toc/2076-2607
DOI: 10.3390/microorganisms11081881
URL الوصول: https://doaj.org/article/ac16d37892de41f7976d4ad3fc65b562
رقم الأكسشن: edsdoj.16d37892de41f7976d4ad3fc65b562
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:20762607
DOI:10.3390/microorganisms11081881