دورية أكاديمية

Selection of suitable internal controls for gene expression normalization in rats with spinal cord injury

التفاصيل البيبلوغرافية
العنوان: Selection of suitable internal controls for gene expression normalization in rats with spinal cord injury
المؤلفون: Wei Liu, Jie Yu, Yi-Fan Wang, Qian-Qian Shan, Ya-Xian Wang
المصدر: Neural Regeneration Research, Vol 17, Iss 6, Pp 1387-1392 (2022)
بيانات النشر: Wolters Kluwer Medknow Publications, 2022.
سنة النشر: 2022
المجموعة: LCC:Neurology. Diseases of the nervous system
مصطلحات موضوعية: genorm analysis, reference genes, internal control genes, normalization, normfinder analysis, reverse transcription-quantitative polymerase chain reaction, spinal cord injury, stability of gene expression, Neurology. Diseases of the nervous system, RC346-429
الوصف: There is a lack of systematic research on the expression of internal control genes used for gene expression normalization in real-time reverse transcription polymerase chain reaction in spinal cord injury research. In this study, we used rat models of spinal cord hemisection to analyze the expression stability of 13 commonly applied reference genes: Actb, Ankrd27, CypA, Gapdh, Hprt1, Mrpl10, Pgk1, Rictor, Rn18s, Tbp, Ubc, Ubxn11, and Ywhaz. Our results show that the expression of Ankrd27, Ubc, and Tbp were stable after spinal cord injury, while Actb was the most unstable internal control gene. Ankrd27, Ubc, Tbp, and Actb were consequently used to investigate the effects of internal control genes with differing stabilities on the normalization of target gene expression. Target gene expression levels and changes over time were similar when Ankrd27, Ubc, and Tbp were used as internal controls but different when Actb was used as an internal control. We recommend that Ankrd27, Ubc, and Tbp are used as internal control genes for real-time reverse transcription polymerase chain reaction in spinal cord injury research. This study was approved by the Administration Committee of Experimental Animals, Jiangsu Province, China (approval No. 20180304-008) on March 4, 2018.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1673-5374
Relation: http://www.nrronline.org/article.asp?issn=1673-5374;year=2022;volume=17;issue=6;spage=1387;epage=1392;aulast=Liu; https://doaj.org/toc/1673-5374
DOI: 10.4103/1673-5374.327350
URL الوصول: https://doaj.org/article/2a51440108954b5f86995299df2515a5
رقم الأكسشن: edsdoj.2a51440108954b5f86995299df2515a5
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:16735374
DOI:10.4103/1673-5374.327350