دورية أكاديمية
Characterization and genome analysis of Vibrio phage vB_VhaP_PG11, representing a new viral genus
| العنوان: | Characterization and genome analysis of Vibrio phage vB_VhaP_PG11, representing a new viral genus |
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| المؤلفون: | Yajun Jing, Ruizhe Guo, Hongmin Wang, Yantao Liang, Yundan Liu, Yifei Feng, Qin Ma, Hongbing Shao, Yeong Yik Sung, Wen Jye Mok, Li Lian Wong, Yu-Zhong Zhang, Andrew McMinn, Min Wang, Jinyan Xing |
| المصدر: | Frontiers in Marine Science, Vol 9 (2023) |
| بيانات النشر: | Frontiers Media S.A., 2023. |
| سنة النشر: | 2023 |
| المجموعة: | LCC:Science LCC:General. Including nature conservation, geographical distribution |
| مصطلحات موضوعية: | vibrio phage, genomic and comparative genomic analysis, phylogenetic analysis, schitoviridae, qingschitovirus, Science, General. Including nature conservation, geographical distribution, QH1-199.5 |
| الوصف: | Vibrio is a kind of common gram-negative bacteria, which is widely distributed in marine and estuarine environments. In the study, a novel marine phage vB_VhaP_PG11, infecting Vibrio hangzhouensis, was isolated from the offshore waters of Qingdao, China. vB_VhaP_PG11 is a double-stranded DNA phage. The whole genome proteomic tree shows that vB_VhaP_PG11 phage is related to two Vibrio phages, Vibrio phage 1.238.A._10N.261.52.F10 and Vibrio phage 1.245.O._10N.261.54.C7, but with low homology. Their amino acids identity with vB_VhaP_PG11 is 42.77 and 41.49% respectively. The prediction results of genome-blast distance phylogeny (GBDP) and the analysis gene-sharing network indicate that vB_VhaP_PG11 belongs to a new genus in Schitoviridae, named Qingschitovirus. The study of Vibrio phage vB_VhaP_PG11 provides basic information contributing to a better understanding of interactions between Vibrio phages and their hosts and helps analyze unknown viral sequences in the metagenomic database. |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 2296-7745 21940029 |
| Relation: | https://www.frontiersin.org/articles/10.3389/fmars.2022.1092917/full; https://doaj.org/toc/2296-7745 |
| DOI: | 10.3389/fmars.2022.1092917 |
| URL الوصول: | https://doaj.org/article/325cef68e219400294474cf0fe72f26c |
| رقم الأكسشن: | edsdoj.325cef68e219400294474cf0fe72f26c |
| قاعدة البيانات: | Directory of Open Access Journals |
Full Text Finder | تدمد: | 22967745 21940029 |
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| DOI: | 10.3389/fmars.2022.1092917 |