دورية أكاديمية
TrichomeYOLO: A Neural Network for Automatic Maize Trichome Counting
| العنوان: | TrichomeYOLO: A Neural Network for Automatic Maize Trichome Counting |
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| المؤلفون: | Jie Xu, Jia Yao, Hang Zhai, Qimeng Li, Qi Xu, Ying Xiang, Yaxi Liu, Tianhong Liu, Huili Ma, Yan Mao, Fengkai Wu, Qingjun Wang, Xuanjun Feng, Jiong Mu, Yanli Lu |
| المصدر: | Plant Phenomics, Vol 5 (2023) |
| بيانات النشر: | American Association for the Advancement of Science (AAAS), 2023. |
| سنة النشر: | 2023 |
| المجموعة: | LCC:Plant culture LCC:Genetics LCC:Botany |
| مصطلحات موضوعية: | Plant culture, SB1-1110, Genetics, QH426-470, Botany, QK1-989 |
| الوصف: | Plant trichomes are epidermal structures with a wide variety of functions in plant development and stress responses. Although the functional importance of trichomes has been realized, the tedious and time-consuming manual phenotyping process greatly limits the research progress of trichome gene cloning. Currently, there are no fully automated methods for identifying maize trichomes. We introduce TrichomeYOLO, an automated trichome counting and measuring method that uses a deep convolutional neural network, to identify the density and length of maize trichomes from scanning electron microscopy images. Our network achieved 92.1% identification accuracy on scanning electron microscopy micrographs of maize leaves, which is much better performed than the other 5 currently mainstream object detection models, Faster R-CNN, YOLOv3, YOLOv5, DETR, and Cascade R-CNN. We applied TrichomeYOLO to investigate trichome variations in a natural population of maize and achieved robust trichome identification. Our method and the pretrained model are open access in Github (https://github.com/yaober/trichomecounter). We believe TrichomeYOLO will help make efficient trichome identification and help facilitate researches on maize trichomes. |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 2643-6515 |
| Relation: | https://doaj.org/toc/2643-6515 |
| DOI: | 10.34133/plantphenomics.0024 |
| URL الوصول: | https://doaj.org/article/39b8564cceaf442ca09ff18bc80b0df1 |
| رقم الأكسشن: | edsdoj.39b8564cceaf442ca09ff18bc80b0df1 |
| قاعدة البيانات: | Directory of Open Access Journals |
Full Text Finder | تدمد: | 26436515 |
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| DOI: | 10.34133/plantphenomics.0024 |