دورية أكاديمية

Decoding meningioma heterogeneity and neoplastic cell—macrophage interaction through single-cell transcriptome profiling across pathological grades

التفاصيل البيبلوغرافية
العنوان: Decoding meningioma heterogeneity and neoplastic cell—macrophage interaction through single-cell transcriptome profiling across pathological grades
المؤلفون: Hailang Fan, Lairong Song, Jian Fan, Junpeng Ma, Xiaojie Li, Junting Zhang, Jian Hu, Zhen Wu, Dake Zhang, Liang Wang
المصدر: Journal of Translational Medicine, Vol 21, Iss 1, Pp 1-18 (2023)
بيانات النشر: BMC, 2023.
سنة النشر: 2023
المجموعة: LCC:Medicine
مصطلحات موضوعية: Meningiomas, scRNA-seq, Heterogeneity, MIF, CD74, Medicine
الوصف: Abstract Background Analyzing meningioma of distinct pathological types at the single-cell level can provide new and valuable insights into the specific biological mechanisms of each cellular subpopulation, as well as their vital interplay within the tumor microenvironment. Methods We recruited patients diagnosed with four distinct types of meningioma and performed single-cell RNA sequencing on their tumor samples, concurrently analyzing a publicly available dataset for comparison. Next, we separated the cells into discrete clusters and identified their unique identities. Using pseudotime analysis, we demonstrated cellular differentiation and dynamics. To investigate biological function, we employed weighted gene co-expression network analysis, gene regulatory network, and gene set enrichment analysis. Additionally, we conducted cell–cell communication analyses to characterize interactions among different clusters and validated a crucial interaction using multiple immunofluorescence staining. Results The single-cell transcriptomic profiles for five meningioma of different pathological types demonstrated that neoplastic cells exhibited high inter-sample heterogeneity and diverse biological functions featured by metabolic regulation. A small cluster of neoplastic cells (N5 cluster,
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1479-5876
Relation: https://doaj.org/toc/1479-5876
DOI: 10.1186/s12967-023-04445-4
URL الوصول: https://doaj.org/article/47c46504377242f38e964ebe0dd8d5d8
رقم الأكسشن: edsdoj.47c46504377242f38e964ebe0dd8d5d8
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:14795876
DOI:10.1186/s12967-023-04445-4