دورية أكاديمية

AI4DR: Development and implementation of an annotation system for high-throughput dose-response experiments

التفاصيل البيبلوغرافية
العنوان: AI4DR: Development and implementation of an annotation system for high-throughput dose-response experiments
المؤلفون: Marc Bianciotto, Lionel Colliandre, Kun Mi, Isabelle Schreiber, Cécile Delorme, Stéphanie Vougier, Hervé Minoux
المصدر: Artificial Intelligence in the Life Sciences, Vol 3, Iss , Pp 100063- (2023)
بيانات النشر: Elsevier, 2023.
سنة النشر: 2023
المجموعة: LCC:Science (General)
مصطلحات موضوعية: Dose-response curve, Artificial intelligence, Annotation system, High throughput screening, Science (General), Q1-390
الوصف: One of the common strategies to identify novel chemical matter in drug discovery consists in performing a High Throughput Screening (HTS). However, the large amount of data generated at the dose-response (DR) step of an HTS campaign requires a careful analysis to detect artifacts and correct erroneous datapoints before validating the experiments. This step which requires to review each DR experiment can be time consuming and prone to human errors or inconsistencies. AI4DR is a system that has been developed for the classification of DR curves based on a Convolutional Neural Network (CNN) acting on normalized images of the DR curves. AI4DR allows the annotation in minutes of thousands of curves among 14 categories to help the High Throughput Screening biologists in their analyses. Several categories are associated with active and inactive compounds, other categories correspond to features of interest such as the presence of noise, a weaker effect at high doses, or a suspiciously weak or strong slope at the inflexion point of the DR curves of actives. The classifier has been trained on an algorithmically generated dataset curated and refined by experts, tested using real screening campaigns and improved using thousands of annotations by experts. The solution is deployed using a MLFlow model server interfaced with the Genedata Screener data analysis software used by the end users. AI4DR improves the consistency, the robustness, and the speed of HTS data analysis as well as reducing the human effort to identify faster new medicines for patients.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2667-3185
Relation: http://www.sciencedirect.com/science/article/pii/S2667318523000077; https://doaj.org/toc/2667-3185
DOI: 10.1016/j.ailsci.2023.100063
URL الوصول: https://doaj.org/article/4b1eeeb21d1d47e49e0b39e46a0c147d
رقم الأكسشن: edsdoj.4b1eeeb21d1d47e49e0b39e46a0c147d
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:26673185
DOI:10.1016/j.ailsci.2023.100063