دورية أكاديمية

The Hypersaline Soils of the Odiel Saltmarshes Natural Area as a Source for Uncovering a New Taxon: Pseudidiomarina terrestris sp. nov

التفاصيل البيبلوغرافية
العنوان: The Hypersaline Soils of the Odiel Saltmarshes Natural Area as a Source for Uncovering a New Taxon: Pseudidiomarina terrestris sp. nov
المؤلفون: Cristina Galisteo, Rafael R. de la Haba, Antonio Ventosa, Cristina Sánchez-Porro
المصدر: Microorganisms, Vol 12, Iss 2, p 375 (2024)
بيانات النشر: MDPI AG, 2024.
سنة النشر: 2024
المجموعة: LCC:Biology (General)
مصطلحات موضوعية: Pseudidiomarina, hypersaline soils, phylogenomics, genome functional analysis, rare biosphere, Biology (General), QH301-705.5
الوصف: The hypersaline soils of the Odiel Saltmarshes Natural Area are an extreme environment with high levels of some heavy metals; however, it is a relevant source of prokaryotic diversity that we aim to explore. In this study, six strains related to the halophilic genus Pseudidiomarina were isolated from this habitat. The phylogenetic study based on the 16S rRNA gene sequence and the fingerprinting analysis suggested that they constituted a single new species within the genus Pseudidiomarina. Comparative genomic analysis based on the OGRIs indices and the phylogeny inferred from the core genome were performed considering all the members of the family Idiomarinaceae. Additionally, a completed phenotypic characterization, as well as the fatty acid profile, were also carried out. Due to the characteristics of the habitat, genomic functions related to salinity and high heavy metal concentrations were studied, along with the global metabolism of the six isolates. Last, the ecological distribution of the isolates was studied in different hypersaline environments by genome recruitment. To sum up, the six strains constitute a new species within the genus Pseudidiomarina, for which the name Pseudidiomarina terrestris sp. nov. is proposed. The low abundance in all the studied hypersaline habitats indicates that it belongs to the rare biosphere in these habitats. In silico genome functional analysis suggests the presence of heavy metal transporters and pathways for nitrate reduction and nitrogen assimilation in low availability, among other metabolic traits.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2076-2607
Relation: https://www.mdpi.com/2076-2607/12/2/375; https://doaj.org/toc/2076-2607
DOI: 10.3390/microorganisms12020375
URL الوصول: https://doaj.org/article/52f66e3db6be48778b7f57e4d6b88503
رقم الأكسشن: edsdoj.52f66e3db6be48778b7f57e4d6b88503
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:20762607
DOI:10.3390/microorganisms12020375