دورية أكاديمية

Development and operation of a digital platform for sharing pathology image data

التفاصيل البيبلوغرافية
العنوان: Development and operation of a digital platform for sharing pathology image data
المؤلفون: Yunsook Kang, Yoo Jung Kim, Seongkeun Park, Gun Ro, Choyeon Hong, Hyungjoon Jang, Sungduk Cho, Won Jae Hong, Dong Un Kang, Jonghoon Chun, Kyoungbun Lee, Gyeong Hoon Kang, Kyoung Chul Moon, Gheeyoung Choe, Kyu Sang Lee, Jeong Hwan Park, Won-Ki Jeong, Se Young Chun, Peom Park, Jinwook Choi
المصدر: BMC Medical Informatics and Decision Making, Vol 21, Iss 1, Pp 1-8 (2021)
بيانات النشر: BMC, 2021.
سنة النشر: 2021
المجموعة: LCC:Computer applications to medicine. Medical informatics
مصطلحات موضوعية: Digital pathology, Open platform, Artificial intelligence-assisted annotation, Medical image dataset, Computer applications to medicine. Medical informatics, R858-859.7
الوصف: Abstract Background Artificial intelligence (AI) research is highly dependent on the nature of the data available. With the steady increase of AI applications in the medical field, the demand for quality medical data is increasing significantly. We here describe the development of a platform for providing and sharing digital pathology data to AI researchers, and highlight challenges to overcome in operating a sustainable platform in conjunction with pathologists. Methods Over 3000 pathological slides from five organs (liver, colon, prostate, pancreas and biliary tract, and kidney) in histologically confirmed tumor cases by pathology departments at three hospitals were selected for the dataset. After digitalizing the slides, tumor areas were annotated and overlaid onto the images by pathologists as the ground truth for AI training. To reduce the pathologists’ workload, AI-assisted annotation was established in collaboration with university AI teams. Results A web-based data sharing platform was developed to share massive pathological image data in 2019. This platform includes 3100 images, and 5 pre-processing algorithms for AI researchers to easily load images into their learning models. Discussion Due to different regulations among countries for privacy protection, when releasing internationally shared learning platforms, it is considered to be most prudent to obtain consent from patients during data acquisition. Conclusions Despite limitations encountered during platform development and model training, the present medical image sharing platform can steadily fulfill the high demand of AI developers for quality data. This study is expected to help other researchers intending to generate similar platforms that are more effective and accessible in the future.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1472-6947
Relation: https://doaj.org/toc/1472-6947
DOI: 10.1186/s12911-021-01466-1
URL الوصول: https://doaj.org/article/e5c55da68d9e4ddbb087f995abc4bc10
رقم الأكسشن: edsdoj.5c55da68d9e4ddbb087f995abc4bc10
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:14726947
DOI:10.1186/s12911-021-01466-1